Pollicipes pollicipes (gooseneck barnacle): 119114029
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Entry
119114029 CDS
T08250
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm8
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
ppoi
Pollicipes pollicipes (gooseneck barnacle)
Pathway
ppoi03018
RNA degradation
ppoi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppoi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119114029
09123 Folding, sorting and degradation
03018 RNA degradation
119114029
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppoi03019
]
119114029
03041 Spliceosome [BR:
ppoi03041
]
119114029
Messenger RNA biogenesis [BR:
ppoi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
119114029
mRNA degradation factors
5'-3' decay
Lsm complex
119114029
Spliceosome [BR:
ppoi03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
119114029
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
DUF150_C
SM-ATX
LSM12_LSM
Motif
Other DBs
NCBI-GeneID:
119114029
NCBI-ProteinID:
XP_037094155
LinkDB
All DBs
Position
Unknown
AA seq
97 aa
AA seq
DB search
MASSIESYVGHTVSVITADGRNIVGTLKGFDQTINIILDESHERVYSQSAGVEQVVLGLY
LIRGDNVVVIGEIDEDLDSRVDFQNVHAEPLMSIVRG
NT seq
294 nt
NT seq
+upstream
nt +downstream
nt
atggcctccagcatagagtcctacgtgggccacactgtctccgtcatcacagcagatggc
cgcaacatcgtgggcacgctgaaaggcttcgaccagaccatcaacatcatcctggatgag
agtcacgagcgtgtgtacagccagagcgccggcgtggagcaggtggtgttgggtctgtac
ctgatccgtggcgacaacgtggtggtgatcggcgagattgacgaggatctggactcgcgc
gtcgacttccaaaacgtgcacgccgagccgctgatgtcgatcgtgcgcggctag
DBGET
integrated database retrieval system
