Pollicipes pollicipes (gooseneck barnacle): 119114927
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Entry
119114927 CDS
T08250
Name
(RefSeq) LOW QUALITY PROTEIN: tRNA:m(4)X modification enzyme TRM13 homolog
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
ppoi
Pollicipes pollicipes (gooseneck barnacle)
Brite
KEGG Orthology (KO) [BR:
ppoi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppoi03016
]
119114927
Enzymes [BR:
ppoi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
119114927
Transfer RNA biogenesis [BR:
ppoi03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
119114927
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRM13
zf-U11-48K
HC2
Methyltransf_32
Methyltransf_31
Motif
Other DBs
NCBI-GeneID:
119114927
NCBI-ProteinID:
XP_037094880
LinkDB
All DBs
Position
Unknown
AA seq
579 aa
AA seq
DB search
MKCPLDGTHTCFVKKLQRHLKVCNARVTVVPPYFVQDINSGDGTIPGKRHDNSPAVPCSP
ASERVRQPVAADGATHPLLAESLSRPELGADTLKHLRQNAALLAVLRDAGLLQGPRTFVE
LGSGKAQLSFWLARAVDSQSQIVLVDRASHRHKAENKLKDLADMPDIQRLKIDIRHLNLS
GCDACIGRPVVAVSKHLCGAATDLGIRAATAAPMPDTSQPAVSQPESTATSAVQSEFTAT
SAVQSESTTASRVHPASTEASDVQPGSTEASGAQPESTEAPATQRDCPGPASCSRAVVSD
VQGILIALCCHHRVEWTSYCRQTVSAGVRVLCRGFHRSEGRGGLGHLRHPQLGQTPAERR
PATSGARTPTSGRDRVPPDQATADQTTAVQTTADQAIADQATANQVTADLVTTDQATADQ
VTTDRTTADQATAGQTTADQATAGQTAADQATAGQTTADRATGDQTTADQTVASQTATVQ
ASADLASPEQTQKRPGSAEEADAKRARLEAPGPGSRDASAGRYHRLGLTPERRTAVGFMC
KRLMDEGRVRYLAARGFSARLVCYVPAAVSPENVLLLAT
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgccccttggatggtacacacacctgttttgtcaagaagctccaaaggcacctg
aaagtatgcaatgcccgggtgacagtagttccaccatattttgtgcaagacataaactct
ggtgatggcaccatcccaggaaaaaggcatgacaattcaccagctgtgccctgctcaccc
gcctcagagcgcgtgcggcagccagtggcggcggacggcgcgacccacccgctgctggcg
gagagcctctcgcggcccgagctgggcgctgacacgctgaagcacctgcggcagaacgcg
gcgctgctggccgtgctgcgggacgccggcctgctgcaggggccgcgcaccttcgtcgag
ctcggctccggcaaagctcagctgtcgttctggttggcgcgggccgtcgacagccagtcc
cagatcgtgctggtggaccgggcctctcaccgacacaaggctgaaaataaactgaaggat
ctcgccgacatgcctgacatccaacggctgaaaatcgacatacgccatctgaacctgtct
ggctgtgacgcctgcatcggcaggcccgtggtggccgtcagcaagcatctgtgtggggct
gctactgatctgggcatccgcgccgctacggccgcgcctatgccggacacttctcaaccc
gccgtcagccagccggagtccaccgcgacctctgccgtccagtcagagttcaccgcgacc
tctgccgtccagtcagagtccactacagcctcccgtgttcatccagcgtccaccgaagcg
tcagatgttcagccagggtccaccgaagcgtcaggtgctcagccagagtccaccgaggca
cccgccacccaacgggattgtccaggcccggcgagctgtagcagggctgtggtgtcggac
gtccaaggcattctgatcgccctttgctgccaccacagggtcgagtggaccagctactgt
cggcaaaccgtttctgcaggagtgcgggttctctgccgaggatttcaccgctctgaaggg
cgtggcggcctgggccacctgcggcacccccagctgggacagaccccagcagaacggcga
ccagccacgagcggagcgcgaacacccacctcagggcgcgaccgggtcccgcctgaccag
gccaccgcagaccagaccaccgcagtacagaccaccgcagaccaagccatcgcagaccag
gccaccgcaaaccaggtcactgcagacctggtcaccacggaccaggctaccgcagaccag
gtcaccacagaccgtaccaccgcagaccaggccaccgcaggccagaccactgcagaccag
gccaccgcaggccagaccgccgcagaccaggccaccgcaggccagaccaccgcagaccgg
gccaccggagaccagaccaccgcagaccagaccgtggcaagccagaccgcgacagtccag
gcctcagcggacctcgcctcgccagaacagactcagaagcggccgggcagcgcggaggag
gctgacgccaagcgggctcgtctggaggcgcccggaccgggttctcgcgacgccagcgcg
ggccggtaccaccggctgggcctgacgccggagcggcgcacggccgtcggcttcatgtgc
aagcggctgatggacgaggggcgcgtacggtacctggcggcgcgcggcttttccgcccgt
ctggtctgctacgtgccggccgccgtttcgcccgagaacgtgctgctgctggccacc
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