Paenibacillus polymyxa CR1: X809_00035
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Entry
X809_00035 CDS
T02956
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
ppol
Paenibacillus polymyxa CR1
Brite
KEGG Orthology (KO) [BR:
ppol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppol03032
]
X809_00035 (gyrB)
03400 DNA repair and recombination proteins [BR:
ppol03400
]
X809_00035 (gyrB)
Enzymes [BR:
ppol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
X809_00035 (gyrB)
DNA replication proteins [BR:
ppol03032
]
Prokaryotic type
DNA Topoisomerases
X809_00035 (gyrB)
DNA repair and recombination proteins [BR:
ppol03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
X809_00035 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AHC17778
LinkDB
All DBs
Position
5921..7831
Genome browser
AA seq
636 aa
AA seq
DB search
MSMNQPSYDAGEIQVLEGLEAVRKRPGMYIGSTSAKGLHHLVWEVVDNSIDEALAGYCDS
IQVVVHEDNSVTVTDNGRGIPVSEHAKMKKSALEVVMTVLHAGGKFGGGGYKVSGGLHGV
GVSVVNALSSKMIVHVKRDGHLYEQEYHRGAPQYDVRVIGDTDETGTQTTFYPDDQIFTE
TTVYDYDTLQTRIRELAFLNKGIAISLTDERTGASDTFHYEGGISEYVQFLNQKREALHE
QPIYVEGSRDMIQVEVALQYNDSYTENIYSFANNINTHEGGTHESGFKSALTRIINDYAR
KNGLIKDNNANLTGDDVREGLTAIISVKIPEPQFEGQTKTKLGNSEVRGIVESLFAEKLQ
EFLEENPSVSRRVVDKSLQAARAREAARKARELTRRKSALEISSLPGKLADCSSKDASIS
ELYIVEGDSAGGSAKQGRDRHFQAILPIRGKILNVEKARLDRILSSDEIRSMVTAMGTGI
GDDFDIAKARYHKVIIMTDADVDGAHIRTLLLTFFYRYMRKIIDAGYIYIAQPPLFKVER
NKVVRYANSEAERDEIIREFGENAKYNVQRYKGLGEMNATQLWETTMDPESRTMLQVTVS
DAMLADTLFNTLMGDNVEPRRDFIQEHAKYVKNLDF
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgaatcaaccgtcttatgatgcgggcgagattcaggtcctcgagggcctggaa
gcggttcggaaacgtcccgggatgtatattggctccacgagcgccaaaggtctccatcat
ctggtctgggaagttgtggacaacagcattgacgaagcgctggcgggttattgtgacagc
attcaagttgtggttcacgaagataacagcgttaccgttacagataacggacgcggtatt
ccggtaagcgaacacgccaaaatgaaaaaatctgcgctggaagtcgttatgactgtactt
cacgccggcggtaaattcggaggcggagggtacaaggtatccggtggtctgcacggggtt
ggtgtatcggtagtgaacgctctctccagcaaaatgatcgttcatgttaaacgggacgga
catctgtatgagcaggaatatcaccgtggtgctccgcagtatgatgtcagagtcatcggt
gatacagacgagacgggtacccaaacgaccttctatccggacgatcaaatctttacagaa
acgaccgtatatgattatgatacgctccaaacgcggattcgtgagttggctttcctgaac
aaaggcattgcaatcagcttgactgatgaacggacgggagccagcgatacattccattac
gagggcggaatcagtgaatatgtgcaattcttgaatcaaaaaagagaagcgttacatgaa
cagccgatttatgtcgaaggctcgcgtgatatgattcaagtcgaagttgctttgcaatat
aacgacagctataccgagaatatttattcttttgctaacaacatcaatacccatgagggc
ggaactcacgaatcaggcttcaagagtgcattaacccggattattaacgattatgcacgt
aaaaatggcttgattaaggacaacaatgccaacttgaccggtgatgatgtgcgtgaagga
ttgacggcgattatctccgtcaaaattccagaaccacagtttgagggtcagaccaagaca
aagctggggaacagtgaggtgcgagggattgtcgaatccctattcgcagagaaactccag
gaattcctagaggaaaatccgtctgtttcccgccgtgtggttgataaatcattacaagca
gcacgtgcccgggaagcagcgcgtaaagcgcgtgagcttacacgtcgtaaaagcgcgctg
gaaatcagttcgctcccaggcaagctggcagattgctcctctaaggatgcttcgattagt
gaactgtacatcgtcgaaggtgactcagcagggggttcggccaagcagggtcgtgatcgt
cactttcaagctattttgccgattcgcggtaaaatcctgaatgtcgaaaaggcacgcttg
gaccgtattttgtccagtgatgaaatccggtcgatggtaacagcaatgggcacagggatc
ggagacgactttgacatcgccaaagcccgttatcacaaggtcattatcatgacagatgcg
gatgtcgatggtgcccatattcgtacgttgttgctgacgttcttctatcggtacatgcgt
aaaatcattgatgcaggctatatttatattgctcagccaccactattcaaagtagagcgt
aacaaagttgtacgttatgcgaactccgaggcggaacgtgatgagatcatcagggaattt
ggagaaaacgcgaagtacaatgtacagcgctataaaggtttgggtgagatgaatgcgacc
caactttgggaaactacgatggaccctgagagtcgtactatgcttcaggtaactgtcagt
gacgcgatgctggctgatacactgttcaataccttgatgggtgataatgtagaacctcgt
cgtgactttatccaagaacatgcgaagtacgtgaaaaatcttgatttttaa
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