Paenibacillus polymyxa CR1: X809_00045
Help
Entry
X809_00045 CDS
T02956
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
ppol
Paenibacillus polymyxa CR1
Brite
KEGG Orthology (KO) [BR:
ppol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppol03032
]
X809_00045
03400 DNA repair and recombination proteins [BR:
ppol03400
]
X809_00045
Enzymes [BR:
ppol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
X809_00045
DNA replication proteins [BR:
ppol03032
]
Prokaryotic type
DNA Topoisomerases
X809_00045
DNA repair and recombination proteins [BR:
ppol03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
X809_00045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
NTase_sub_bind
Motif
Other DBs
NCBI-ProteinID:
AHC17780
LinkDB
All DBs
Position
9267..11831
Genome browser
AA seq
854 aa
AA seq
DB search
MADQNNSQIINRDIGVEMRESFMDYAMSIIVSRALPDVRDGLKPVHRRILYAMSELGMSP
DKPYKKSARIVGEVIGKYHPHGDTAVYDTMVRMAQDFSLRYMLVDGHGNFGSVDGDMAAA
MRYTEARLSKIAMEMLRDLNKETVDFMPNYDGEESEPVVLPARYPNLLVNGVGGIAVGMA
TNIPPHNLGEVIDGVQALIENPDITPMELMDYIQGPDFPTAGYILGRSGIRQAYQTGRGS
VTMRAKTTIEEIGNKARIIVHELPYQVNKARLVEKIAELVRDKRIEGITDLRDESDRTGM
RVVIELRRDVNPNVVLNNLFKHTAMQSNFGINMLAIVNNEPKILNLKDVLYHYLKHQVEV
IRRRTEFDLKKAEARAHILEGLRIALDHLDEVIALIRSSQTAEAAREGLIERFLLTLEQS
QAILDMRLQRLTGLEREKIENEYNELIQKIAEYREILANEHLVLNIISEELNELKERFAD
DRRTEITVGEESILDEDLIPREDVIITVTHTGYIKRLPVTTYRSQKRGGRGVVGMDTKDE
DFVEHLFITNSHHHLLFFTDKGKVYRIKAYEIPDLSRTARGTPIINLIQIEQGESINAVI
PIEEFVEDSYLFFATQHGIIKKTPLDDYANIRKGGLIAINLREDDALIEVKLTDGQQEMI
IGTAQGMSIRFPESDVRSMGRSATGVKGINLDESDAVIGMDIVDTSLDILIVTAKGYGKR
TPVVDYRIQSRGGKGIKTINVTDKNGPVVGLKVVKTEEDLMIITASGTLIRTSMGEISTM
GRNTQGVRLINIRDDDSVATVCRANKNEEQDELLEELLEGGEAGEGSSLSSVEPTLETNT
EGAEGNDPESSEGE
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atggcggatcaaaataactcgcaaatcatcaatagggatatcggagtggaaatgcgcgaa
tcctttatggattatgccatgagtattattgttagccgtgccttgcctgatgtgcgggac
ggactgaagccggtacaccgtcgtattttgtacgcgatgtccgagctgggcatgtcgcca
gataagccttacaaaaaatcggcaagaatcgtcggcgaagttatcggtaaatatcaccct
catggtgatacggctgtatatgatacgatggtgcggatggcgcaggatttttctttgcgt
tatatgttggtggatggacacggtaactttggctccgtggatggagatatggcggctgcg
atgcgttacaccgaagcacggttgtccaagattgccatggaaatgctacgtgatttgaac
aaagagaccgttgattttatgccgaactacgatggtgaagagagcgagcccgtcgtatta
cctgcacgttatcctaacttgctggtgaatggtgtcggcggaattgcagtcggaatggct
accaatattcctccgcataacttgggagaggttatcgatggtgtacaagcattgatcgaa
aaccccgacattacgccgatggaacttatggattatattcaagggcccgatttcccgaca
gcaggttatattttaggacgctctggtatccgtcaggcgtaccagactggccgcggatct
gtgaccatgcgtgcgaagaccaccatagaagagattggcaataaagcacggattatcgtg
catgagttgccttaccaagtgaataaggctcgtctggttgagaaaattgccgaattagta
cgtgacaaacgtattgaaggcattacggatcttcgggatgaatcggaccgtacaggtatg
cgtgtcgttatcgagttgcgtagggacgtgaacccgaacgtcgttctgaataatttgttt
aaacatacggctatgcagtcgaatttcggtattaatatgcttgccattgtaaacaacgaa
ccgaagattttgaacctgaaggatgtcttgtatcattatctcaaacatcaggtcgaggtt
attcgtcgccggacagaatttgatctgaaaaaagccgaagccagagcacacattctggaa
ggcttgcgcattgcccttgaccatctggacgaagttattgctttgattcgttcttcccaa
actgcagaagcagctcgtgaaggactgattgagcgtttcttgctcactcttgagcagtct
caggctattctcgatatgcgtctgcaacgcttaaccggtttggaacgtgagaagatcgag
aacgaatataacgagctaatacaaaagattgcggaataccgtgagattttggcgaacgag
catctggtactcaacatcattagcgaagagctgaatgaacttaaggaacgcttcgctgat
gaccgtcgcactgaaattacagtgggtgaagagagtattctggatgaggatctcattccg
cgtgaagatgttattattactgtaacccatacgggatatatcaaacgccttcctgttact
acctatcgcagtcaaaaacgcggtggtcgtggtgtagtgggtatggataccaaagatgag
gatttcgtagagcatctgttcattacgaattcacatcatcatttgttattctttaccgac
aagggcaaggtatatcggattaaggcctatgagattcctgaccttagccggacagcccgg
ggaacaccgattattaacctgattcagattgaacagggtgagtcgatcaatgcggtaatt
ccaatcgaggaatttgtggaggatagctatctattctttgcgacccagcatggaatcata
aagaagacaccacttgacgactatgcaaatatccgcaaaggtggcttgattgccattaac
ttgcgtgaagatgacgccctgatcgaagtgaagctgacggacggacaacaggaaatgatt
attggtacagcacaaggcatgtctatccgtttccctgaaagtgatgtacggtctatgggc
cgtagcgctacaggggttaaagggatcaaccttgatgagagtgatgctgtaattggtatg
gacatcgtagataccagcctggatatcctgattgtaacggccaaaggttatggcaagcgt
acccctgttgtggattatcgtatccaaagccgtggaggtaaggggatcaagacgattaat
gttacggataaaaatggtccggttgtcggtctcaaggttgtaaaaaccgaagaggatctg
atgatcattacagctagtggcaccttgattcggactagcatgggggaaatctccacgatg
ggtcggaatacacaaggggtaaggctgattaatattcgcgatgatgattcggttgcaact
gtttgtcgagcgaacaagaatgaggagcaggatgaactgcttgaagaattattagagggt
ggggaagctggagagggctcatctctatcatctgttgaaccaactctcgaaacgaataca
gaaggtgcggaaggtaacgacccagaatcttctgagggcgaataa
DBGET
integrated database retrieval system
