Paenibacillus polymyxa CR1: X809_04980
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Entry
X809_04980 CDS
T02956
Name
(GenBank) hypothetical protein
KO
K18197
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
ppol
Paenibacillus polymyxa CR1
Brite
KEGG Orthology (KO) [BR:
ppol00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
X809_04980
Enzymes [BR:
ppol01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
X809_04980
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Gene cluster
GFIT
Motif
Pfam:
RGL11_C
RGI_lyase
FG-GAP_3
FG-GAP
TcdB_toxin_midN
Motif
Other DBs
NCBI-ProteinID:
AHC18641
LinkDB
All DBs
Position
1077929..1080412
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AA seq
827 aa
AA seq
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MAQGKGAWRKGSLTAALAAMLAMTGTTGGVAAEDLSEPTLQAESAIAVEQNRSGSIQLEK
LDRGLVAAATQEGVFLSWRLLAQEVNGYGSTGLTGADFNVYRDGKKIATVTDSTNYVDKE
GNGKSVYRVASVVNGREKDRSAKVKPWQQGYYELPLQKPADGVTPAGESYTYSANDMSVG
DVDGDGQYEFFVKWDPSNSKDVSQKGYTGNTYVDAYTAEGKLLYRIDLGVNIRSGAHYTQ
MMVYDFDGDGKAELMFKTAPGTKTISFDKKGKPKKEKYITLPREDRKAGITHEDDYRLSR
SDYYEHVVNMFMNWTKHEEVVKGQWPATLEECFGIAPKYNYPLSRKDAESLTDYFMDVYA
PSRSDKNKLREFEGFIVDGPEYLTIFKGKTGAELDTIRYEPERHDDGLMWGDYAMARIEP
ANRVDRFLAGVAYLDGRKPYAVFARGYYTRSTLATYTWDGRHLQKHWMVDSGWTPMTNPF
NDSPHGRDGTDPKFGTLTTQGAHSLSVVDVDGDGKDEIVYGSATIDHDGSLLYSSFDVMP
PESATPGQTARLGHGDALHVTDIDPDRPGKEIFMVHEGGTYAPYGYSLRDAKTGEIIYGA
YSGKDTGRGMVGDIDPDQRGLETWAIGLWTAAGKQLDTKMPGTNMSIKWAADMTTQIVNG
AIDVTPTIEDWKRGTLMTATGTKTNNYTKGTPSLVADIFGDWREEMLVRTADSSAIRIYL
STEPTTHKLYTLMHDPQYRTDVARQNTGYNQPSYTSFYFASDMDWANVPIPKLYTPKALM
EEESSDEVDEAKTAEVDEKEVDETKIDGAEIDAKEIEGEPVVPVEDL
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atggctcaagggaaaggcgcatggcgaaagggaagcttgaccgccgcgttggcagcgatg
ctggcgatgacggggacgactggaggagtggctgcggaagacttgtccgaaccgacgctg
caggcggaatcagcaatcgcagttgaacagaaccgtagcggcagcattcagctggaaaag
ctggatcgcggactggtagctgcggcaacgcaggagggggtatttttaagctggcggtta
ttggctcaagaagtgaacggttacggttcaacggggctgacaggagcggactttaacgta
tatcgtgacggtaagaagatcgcgacagtgaccgacagtaccaactatgtggataaggaa
gggaatgggaaatcggtatacagagtagcttcagtcgttaatgggcgggaaaaggatcgt
agcgccaaagtgaagccatggcagcagggttactatgaacttcctctccaaaagcctgcc
gatggcgtaacaccagcaggtgaatcctatacttattcggccaatgatatgagtgtggga
gatgtggatggagatgggcaatatgaattttttgtaaaatgggacccgtcgaactccaaa
gatgtatctcagaaggggtataccggaaatacgtatgtcgatgcgtatacggccgaaggc
aagctgttgtatcggattgacctgggcgtgaatattcgatcaggtgcgcattatacacag
atgatggtgtacgattttgacggcgatggtaaagccgagctgatgttcaaaacggctcca
gggaccaaaacgatttcttttgataagaagggcaagccgaaaaaagaaaaatatattact
ctgccacgtgaggatcgcaaagcagggattacacatgaggacgattaccgtttgagtcgc
tcggattattatgagcatgtggtgaacatgtttatgaactggacgaagcatgaagaagtg
gtcaagggacaatggcctgctacgctggaggaatgctttggtatcgctccgaagtacaat
tatccgttatcccgaaaggatgcggaaagcctgacagactactttatggatgtatacgcg
ccttcacggagcgacaaaaacaagcttagagagttcgagggcttcatcgtcgatggaccg
gagtatttgacgattttcaaagggaaaacgggagctgagctggataccatccgctatgag
ccggagcgtcatgacgatggcctcatgtggggagattacgccatggcccgcattgaaccc
gccaaccgtgtagaccgctttctggcaggtgtggcttacttggacggacgcaagccgtac
gctgtatttgcacgcggctattatacgcgttccactttggccacctacacatgggatggt
cgccatctccaaaaacattggatggtggacagtggctggacaccgatgaccaatccattt
aacgatagtccgcacgggcgtgatggaacggacccgaaatttggcaccttgaccacacag
ggagcgcattctttgagcgtggtggatgtggacggtgacggcaaggacgaaatcgtatac
ggttccgccacgattgaccatgatggcagcctgttgtacagctcatttgatgtcatgcct
cctgaaagcgcaactccaggtcaaaccgccagattgggacatggcgatgcgctgcatgtg
accgatattgacccggatcgccccggcaaggaaatctttatggtacatgaaggtggcacc
tacgctccatatggctattctttgcgggatgccaaaacgggtgaaatcatttacggcgca
tattccggcaaggatacaggtcggggaatggtcggtgacatagatccggatcagcgaggt
ctggagacgtgggccataggcctgtggaccgcagcgggtaaacagctggatacgaagatg
ccaggtaccaatatgagtatcaaatgggcagctgatatgaccacacaaatcgtaaacggt
gcaattgatgtaaccccaaccattgaggattggaaacgaggtacattgatgaccgccact
ggaaccaaaacgaacaactatacgaaaggaactccatcgctggtagccgacattttcgga
gattggcgggaggaaatgctcgtccgcacagcggatagttcagcaatccgtatctatctg
agcacagagcctacgacgcataaattgtacacgttgatgcatgatccgcaatatcgcacg
gatgtggcgcgtcaaaataccgggtataatcaaccttcctatacgagcttttactttgcg
tccgatatggattgggcgaatgtgccgattcccaagctctacacgccaaaagccttgatg
gaggaagagagcagtgatgaggtggatgaggcaaagacagcggaggtagatgaaaaagaa
gtcgatgaaacgaaaatcgatggggcggaaatagatgcgaaagaaatagagggagagcca
gtagttccagtagaggatttataa
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