Paenibacillus polymyxa CR1: X809_05165
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Entry
X809_05165 CDS
T02956
Name
(GenBank) DNA glycosylase
KO
K03649
double-stranded uracil-DNA glycosylase [EC:
3.2.2.28
]
Organism
ppol
Paenibacillus polymyxa CR1
Pathway
ppol03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
X809_05165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppol03400
]
X809_05165
Enzymes [BR:
ppol01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.28 double-stranded uracil-DNA glycosylase
X809_05165
DNA repair and recombination proteins [BR:
ppol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
X809_05165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AHC18675
LinkDB
All DBs
Position
1128080..1128616
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AA seq
178 aa
AA seq
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MTERETELHEVDDHLDYGLSVVFIGFNPSLKSGEVGHHYANPRNRFWRILEGAGLTPRLY
DPSEDRELLKLGFGFTNIVSRPTRGVEDIAREEYAEGRLKLYEKLKEYCPKVACFVGKGV
YTEYSKKSKVDWGFQPEPLIPEMHEFVAPSSSGLVRMSLEEITDIYRHLQTFLSSEIV
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atgacagagcgagagacagaactgcatgaggtagatgatcatctggattatggattatcc
gttgtattcatcggctttaatcccagcttgaaatcaggcgaggtaggacatcattatgcg
aatccgcgcaaccgcttttggcgcatactggagggagcaggcttgacacctcgcttgtac
gatccatcagaagatcgggagctgctgaagctgggcttcggatttacgaacattgtttcc
cgtcccacgaggggagtagaggacattgcacgcgaggaatacgccgaaggacgtctgaag
ctatacgagaagctaaaggaatactgtccgaaggttgcttgctttgtcggcaaaggcgta
tacaccgaatacagtaaaaaatccaaagtagattggggatttcagcctgaaccgctaatt
cccgagatgcatgaatttgtggcaccttcgtctagcggactggtgcgcatgtcgctggaa
gaaatcacagatatttatcgccatcttcaaacgttcctttcgtcagagatcgtctga
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