Paenibacillus polymyxa CR1: X809_07305
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Entry
X809_07305 CDS
T02956
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
ppol
Paenibacillus polymyxa CR1
Pathway
ppol02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ppol00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
X809_07305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppol03021
]
X809_07305
Transcription machinery [BR:
ppol03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
X809_07305
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GerE
Sigma70_r2
Sigma70_r3
MarR
HTH_23
HTH_40
HTH_38
Sigma70_ECF
Motif
Other DBs
NCBI-ProteinID:
AHC19039
LinkDB
All DBs
Position
1580351..1581301
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AA seq
316 aa
AA seq
DB search
MLSDAYVKLREFAVKDMHNTKLICACKKNTDLLGEFLQENRKFIFSIIIRYRGSIEELKI
KFRVTEEDIYQHACIGLLTALKDFDVSRGIKFTTYVVRPILWEVNQLLYSNSQEVRLSRG
AIDMIRRMAEIEDTLGYRPNEQEMAEFLQVSIERYREVTQFSNVMEQFEALDNFEAVDNS
QSSVHEDVIDKIYVKQLLCSPMFTEHEKTVMHLIMQGANNSQIAEKIHVYPMTISRTLAR
IRKKIVKQHLDTDNIQVESQSKYKNEINLIIEKSKGQKQVMNVTDITDALEVSGYDTSRY
SKRVLYYIRKKANLTI
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
ttgctcagtgatgcatatgtaaaattaagagaatttgctgtgaaagatatgcacaataca
aaacttatttgtgcgtgtaagaagaatacggaccttcttggtgaatttcttcaagagaat
cgtaaatttatattttcaattatcatccgatataggggaagtatagaagagttgaaaata
aagtttagagttaccgaagaagatatatatcaacatgcatgtataggattattaacggca
cttaaagatttcgatgttagtagaggcattaagtttactacgtatgtggtaagacctatt
ttatgggaggttaatcaattactatatagtaactctcaagaggtgaggcttagtcgaggg
gctattgatatgatccgaaggatggcagagatagaagatacactaggctacagaccaaac
gaacaagaaatggctgaatttcttcaagtttctatagaacgttatagggaagttactcag
tttagtaacgtaatggaacaatttgaagcattagataactttgaggctgtagacaactct
caaagtagcgtacatgaggatgtaattgataagatttatgttaagcaattgctatgtagt
cccatgtttacagagcatgagaagactgtgatgcatctaattatgcaaggagcaaataac
tctcaaatcgcagaaaaaattcacgtgtatcccatgacaattagcaggacattagcacgc
attagaaaaaaaatagtgaaacaacacttggatactgacaatattcaagttgaatctcaa
tcaaaatacaaaaatgaaataaatctaattatagagaaaagcaaagggcaaaaacaagta
atgaacgttacagacattactgatgcactcgaagtatccggttatgatacttcaaggtat
tcaaaacgcgtactttactatatccgtaaaaaagcaaatctaactatctaa
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