Paenibacillus polymyxa CR1: X809_09690
Help
Entry
X809_09690 CDS
T02956
Name
(GenBank) helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ppol
Paenibacillus polymyxa CR1
Pathway
ppol03420
Nucleotide excision repair
ppol03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
X809_09690
03430 Mismatch repair
X809_09690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppol03400
]
X809_09690
Enzymes [BR:
ppol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
X809_09690
DNA repair and recombination proteins [BR:
ppol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
X809_09690
MMR (mismatch excision repair)
Other MMR factors
X809_09690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_19
AAA_16
AAA_30
Viral_helicase1
SLFN-g3_helicase
DEAD
NACHT
ResIII
Catalase_C
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AHC19482
LinkDB
All DBs
Position
2066609..2068981
Genome browser
AA seq
790 aa
AA seq
DB search
MTTEQQWNEEQRRVEDVTAVISGRIRKLETEVGSVRGDVVDMRKDFWDEVTINFSEADDV
GETSTSLRQQSEILSERERRHKHSTEALGRLKKLLDSPYFARIDFAEEGQTAERVYLGIA
SLLDNQDEEFLIYDWRAPISNLYYDNMPGPASYKTPAGEMEGELTLKRQFSIRDGQIRFM
FDTGVTIGDELLQAVLSRSSDAQMKSIVATIQKEQNRIIRDDRSRMLIVQGAAGSGKTSA
ALQRVAYLLYKYRDRLRADQVVLFSPNPMFNSYVSTVLPELGEENMLQATFQEYLERRLG
REFQLEDPFEQLEYVLSASLQLGYEARLEGIRFKSSKTFLHVITGYKTYLEQEGMRFKPI
RFQGREVVSVEQMARKFYEFDSTVRLANRLELLRDWMLKELARFGKEECSAPWVDQQMDL
MEPEDYQRAYNRMRRKSKNKGDTFDDFTREREILARMVVSDRLKPLRKWIKALRFVDTTR
LYSELFMNETLLSQLANHAELPVSWGEISRQTLERIQAGELAYEDVTPFLYLRELMLGFR
SNSNIRHVFIDEAQDYSPFQLAFFKRLFPQAKMTALGDFNQAIYAHASVLQDAEPLYDLY
GADQTEMISLTRSYRSTQEIVEFTRGMVAGGEHIVPFNRKGEKPLVNEVHSREKLHQQIA
GNVTELLAEGYESIAVICKNADESAAAYEALEEKLSVKPKLIKKTTPAFEKGIHIIPAYL
AKGVEFDAVLIYDGSAKQYQRESERKLFYTACTRAMHLLHIYSIGEITPFVSLRDSDTYT
RKVEESDRVL
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
gtgactactgaacagcaatggaatgaagaacaacgaagagtagaagatgtgaccgcagta
attagcgggcgtattcggaagctagagacagaggttggttctgtgcgcggagatgtcgtc
gatatgcgtaaagacttctgggatgaggtaacgatcaatttcagtgaggcggatgatgtg
ggcgagacgtccaccagtttgcgtcagcagtctgagattttgtctgagcgggaacgaaga
cacaagcattctacagaggcgttaggtcgtttgaaaaagttacttgattcaccgtatttt
gcacgcattgattttgctgaggaagggcagactgcggaacgtgtttatctggggattgcc
tccctgctggataatcaagatgaggagtttctgatatacgactggcgcgcgcctatttcc
aatctttattacgataacatgccggggcccgcttcatataagaccccggcaggggagatg
gaaggggaactcacgcttaagcgccaattctcgatccgtgatggacagatccgttttatg
ttcgatacaggggtgacgattggagacgaacttcttcaagcagtattgagccgcagctcg
gatgctcaaatgaaaagtattgtcgctaccatccaaaaggagcagaatcgcatcatccgt
gatgatcgaagtcggatgctcattgttcagggggcggcgggaagtggcaaaacctctgct
gcgcttcagagagtagcgtatttactgtataagtaccgggatcgcttacgagcggatcag
gtcgtgttattttcgcctaacccgatgttcaacagttacgtatcgacagtattgcctgaa
ttgggtgaggaaaatatgcttcaggccacgtttcaggaatatttggagcggcgtttgggc
cgggagtttcagttagaagatccatttgaacagctggaatatgtgctttcagcgtcgtta
cagcttgggtatgaagccaggctggagggtatccgctttaagtcgtccaagacattctta
catgtgattacaggctacaagacgtatttggaacaggagggaatgcgttttaaacccatc
cgctttcagggacgtgaggtggtttcagtagagcaaatggcacgcaagttttatgaattc
gactctacggtgcggctggcgaaccgattggaactgctgcgggattggatgctcaaagag
ctggcccgctttggtaaggaagaatgctccgccccatgggtggatcaacagatggatctg
atggagccggaggattatcagcgtgcctataaccgcatgcgccgtaaatccaagaataag
ggcgataccttcgacgattttacgcgtgaaagagaaatattggcgcgtatggtggtcagt
gaccgcttaaagcccctgcgcaaatggattaaggcgcttcgcttcgtagatacgacccgg
ctctacagcgagctgtttatgaacgagacgctgctgagccaactggcgaatcatgcagag
ctgcccgtcagctggggtgaaattagtcgacaaactctggaacgaattcaggctggggag
ttagcgtatgaggatgtgacaccctttttatatttgcgtgagttgatgctgggtttccgt
tctaatagcaacatccgtcacgtgtttattgatgaggcacaggactattccccattccaa
ctggctttcttcaagcgcttatttccacaggctaaaatgacggcactgggtgattttaat
caggctatctatgcccatgcctcggtgcttcaggatgcagagccattgtatgacttgtat
ggtgcagatcagaccgaaatgatttccctgacacgaagctatcgctcaacacaggagatt
gtggaatttactcgggggatggtcgctgggggagagcacattgtaccgtttaatcgtaag
ggtgagaagcctcttgtaaacgaggtgcattcgcgtgaaaagttgcatcaacagatagct
gggaatgtcacagaattgttggcagaaggctatgaatccatcgcggtgatttgtaaaaat
gctgacgaaagcgcggcagcctacgaagcgctggaagaaaagctgtcagtgaagccaaaa
ttgattaagaaaacaactcccgcttttgaaaaggggattcatatcattccggcctacctg
gcaaaaggcgtggaattcgatgcggtcctgatttatgacggatcagcgaaacaataccag
cgtgagagtgagcgtaagttattctacaccgcctgtacgcgagcgatgcatctgctgcat
atttatagcataggggagattacgccattcgtgagtttacgggattcggatacgtatact
cgcaaagtggaagaaagtgatcgtgttctatag
DBGET
integrated database retrieval system
