Paenibacillus polymyxa CR1: X809_10155
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Entry
X809_10155 CDS
T02956
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ppol
Paenibacillus polymyxa CR1
Brite
KEGG Orthology (KO) [BR:
ppol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppol03032
]
X809_10155
03400 DNA repair and recombination proteins [BR:
ppol03400
]
X809_10155
Enzymes [BR:
ppol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
X809_10155
DNA replication proteins [BR:
ppol03032
]
Prokaryotic type
DNA Topoisomerases
X809_10155
DNA repair and recombination proteins [BR:
ppol03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
X809_10155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Zn_ribbon_RPB9
MACPF_b-prism
Toprim_3
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
AHC19574
LinkDB
All DBs
Position
2169979..2172081
Genome browser
AA seq
700 aa
AA seq
DB search
MADSLVIVESPSKAKTIGKYLGSKYIVKASMGHIRDLPKSQIGVEVENDFNPKYITIRGK
GSILKELKDARKKVKKVYLAADPDREGEAIAWHLAHALELDDTADCRVVFNEITKQAVKD
AFKTPRKINMDLVNAQQARRILDRLVGYKISPLLWKKVKKGLSAGRVQSVAVKIILDREN
EISEFVPEEYWTITAKLAIKDSTFEAKFHKLRGEKKELSSEADVQEVLEAIGKSSYKVRD
VKEKERLRNPSPPFTTSSLQQEAARKLNFRASKTMSVAQQLYEGVDLGKEGTVGLITYMR
TDSTRIAASAQEEAKELIIQKYGEAFVPETPRQYSKKAANAQDAHEAIRPTSALRDPETV
KPFMSRDQFRLYKLVWERFMASQMASAIMDTLSVDIEAGETIFRAAGSKVRFPGFMKVYV
EGNDDGKTEEDKLLPPLQPGDKLKKEAVEPKQHFTQPPPRYTEARLVKTLEELGIGRPST
YAPTLETIQKRGYVAIEEKKFFPTELGELVIEQMEEFFPEILNVEFTANMEGDLDHVEEG
EGNWVKVLSDFYESFEKRLEVAEEEMKEIEIKDEVSDVICDKCGSQMVYKLGRFGKFLAC
SAFPDCRNTKPIVKDIGINCPTCGEGHVVERRSKKGRVFYGCDRYPECDFVSWDKPSIKP
CPSCSSLMVEKRTKQGTKLNCTVCDHSEMLEESDESVETS
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atggcggattcactcgtcatcgtggaatcgccttccaaggcgaagacgatcggcaaatac
ttaggcagtaaatatatcgtcaaggcttccatgggtcatatcagggatttaccgaagagt
cagatcggcgtagaggtcgaaaatgattttaatcccaaatacattaccattcgaggtaaa
ggctcaattctaaaagaattaaaggatgcccgaaaaaaagtaaaaaaagtatatctggcg
gctgacccggatcgcgaaggtgaagctattgcctggcatctggcgcatgcgctggaactg
gacgatacagcagattgccgtgttgtatttaatgaaattacgaagcaggctgtcaaagat
gcttttaaaacaccccgtaaaatcaatatggatttggtcaatgctcagcaggcacgacgg
atactggatcgacttgttggctacaaaatcagcccgttgctctggaaaaaggtaaaaaag
ggcctatccgctgggcgtgtgcagtcggttgcggtgaaaattattttggaccgggaaaac
gagatcagtgagtttgtaccggaagaatactggacgattacagctaaactagctattaaa
gacagtacctttgaagcgaaatttcataagctgcgcggtgaaaagaaagaactctctagc
gaagcggatgtacaagaagtgttagaagctatcggaaaatcgtcctacaaggtacgcgat
gttaaagagaaagagcgtttacgcaatccttctcctccattcacaacaagttccttgcag
caggaggcggctcggaagctcaacttccgtgcatctaaaacgatgtctgtagctcagcaa
ctatatgagggtgtggatttaggtaaagaagggaccgtgggtctgattacgtatatgcgt
acggattccacacggatcgccgcttcagctcaagaggaagcgaaagaattaattattcaa
aaatatggcgaagcttttgtacctgaaactcctcgtcaatattcaaaaaaagcggccaac
gcccaggatgcgcatgaagcgattcgtccaacctctgcgttacgcgatccggaaacagtt
aagccgtttatgagtcgggatcagttccgtttgtacaaattggtatgggaacgtttcatg
gccagccagatggcttctgctattatggatactttgtccgtagatattgaagcgggtgag
acgatattccgggcagcaggttctaaggttcgttttccaggtttcatgaaagtgtatgta
gagggaaatgacgacggtaaaaccgaagaagataaactgctgccaccacttcaaccaggc
gataagttaaaaaaagaagcggttgagccgaagcagcattttacacaaccgcctccccgt
tatacggaagcgcgactggtgaagacgctggaagaactgggcataggacgtccaagtacg
tatgcaccaacgctggaaaccattcagaaacgtggttacgttgctattgaagagaagaag
tttttccctacagagctgggcgaattggtcatcgaacagatggaggagttcttcccagag
attctgaatgtggagtttacagctaatatggaaggtgatcttgaccacgtcgaagaaggc
gaaggtaattgggtcaaggtgttgagtgacttttacgagtcattcgagaagcgacttgaa
gtggctgaagaagaaatgaaagaaattgaaataaaagatgaagtatccgatgtcatttgt
gataagtgtggcagccaaatggtgtataagcttggccgatttggtaaattcctggcctgt
tctgcttttccagattgccgtaacacaaagccaattgttaaggatatcgggattaattgt
cctacatgcggtgagggtcatgtcgtcgaacgacggagtaaaaaaggacgtgtcttctat
ggatgtgaccgctacccggaatgtgattttgtttcctgggataaaccgtccattaagcct
tgcccaagttgcagtagcctaatggtcgaaaaacgtacaaaacaaggaacgaagctcaac
tgtactgtctgcgatcacagcgaaatgctggaagagagcgatgagagcgtagagacttct
taa
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