Paenibacillus polymyxa CR1: X809_10625
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Entry
X809_10625 CDS
T02956
Name
(GenBank) dimethylallyladenosine tRNA methylthiotransferase
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
ppol
Paenibacillus polymyxa CR1
Brite
KEGG Orthology (KO) [BR:
ppol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppol03016
]
X809_10625
Enzymes [BR:
ppol01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
X809_10625
Transfer RNA biogenesis [BR:
ppol03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
X809_10625
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
AHC19667
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All DBs
Position
2265624..2267177
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AA seq
517 aa
AA seq
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MEKKTKDYSKYFDFSDAKIISEDEHSKKIRIRGREINIMAEPNHRKEKQRGKEDVQVLYD
NAVPDELKHIGEGKHYIVYTFGCQMNEHDSETIKGLLEQMGYQATEDRKEADIILLNTCA
IRENAEDKVFGELGHLKHLKTEKPGLLLGVCGCMSQEENVVNRIMQKHGFVDMIFGTHNI
HRLPQLVKEALFSKEMVVEVWSKEGDIIENLPKKREGMRAWVNIMYGCDKFCTYCIVPFT
RGKERSRRPEDVIAEVRDLARQGFKEITLLGQNVNAYGKDLKDLNYRFGDLMDDMRKINI
PRVRFTTSHPRDFDDHLVEVLGKGGNLVEHIHLPVQSGNTDILKKMNRKYTRERVLELAA
KIKTAVPHVSLTTDIIVGFPGETDEQFEDTLSLVREVGYDFAYTFIYSPREGTPAASMED
NVPMSVKKERLRRLNIAVNQNSLRFNSRLRGEVVEVLVEGESKNDSKVLAGRTRSNKLVH
FEGSKDLIGSFVQVKITEPMTFYIKGDLVETAVAVNG
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagaaaacaaaagattactccaaatattttgatttctcggatgcgaagattatt
tctgaagatgagcatagcaaaaagatccgtattcgcggacgtgaaatcaacattatggcg
gagccgaaccatagaaaagaaaagcaacgcggtaaagaggatgtacaggtattatatgat
aacgcagtcccggatgagctaaagcatatcggtgagggaaagcattatatcgtatacaca
ttcggttgccaaatgaacgagcatgattccgaaaccataaaaggcttgctggagcaaatg
ggctaccaggcaactgaggatcggaaggaagcagacatcattttactgaacacttgtgct
atccgtgaaaatgcggaggataaagtgtttggcgagctgggtcacctcaagcatctcaaa
acagaaaagccaggactgctgctcggcgtgtgtggctgcatgtcccaagaagagaatgtc
gttaaccggattatgcaaaaacacggttttgtcgatatgatttttggtacccataatatt
catcgtttgcctcagctcgtcaaggaagcactctttagcaaagaaatggtggtcgaagtg
tggtctaaggaaggcgatattatcgaaaacctgccgaagaagcgcgagggtatgcgggct
tgggtgaacattatgtacggttgtgataaattttgcacctattgcattgttccctttaca
cgtggtaaggaaagaagccgccgtccagaggatgttatcgctgaggtacgggatttggca
cgtcaaggctttaaagaaatcaccttactggggcaaaatgttaacgcttatggcaaggat
ttgaaagatttgaattacagattcggggatctgatggatgatatgcgcaaaattaatatc
ccgcgtgtacgttttacgacatcacatccacgtgattttgatgaccatttggttgaagtg
cttggtaagggaggcaatttggtggagcatatccatctgcctgttcaatccggtaatacg
gatatattgaagaaaatgaaccgaaaatatacccgtgagcgtgttctggaactggctgcg
aagattaaaacagctgttccgcatgtttctctgacaacagatatcatcgtaggtttcccg
ggcgaaacagacgagcagtttgaagatactctatccctggtgcgcgaggtcggctatgac
tttgcctacacatttatttattcaccacgtgaaggtacgccagctgcttcgatggaagat
aatgtgcctatgtcggttaaaaaagagcgtctccggcgtctgaacattgctgtgaaccaa
aacagccttcgctttaatagtcgattgcgtggcgaagtggttgaagtgctggtggaaggc
gagagcaaaaatgacagcaaagtgcttgccggtcggacccgttccaataagcttgtacat
tttgagggttctaaggacctgattggttcctttgttcaagtgaaaattacggaacctatg
accttttacatcaaaggtgatctggttgaaacggctgtagcagttaacggataa
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