Paenibacillus polymyxa CR1: X809_31195
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Entry
X809_31195 CDS
T02956
Name
(GenBank) RNA pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
ppol
Paenibacillus polymyxa CR1
Brite
KEGG Orthology (KO) [BR:
ppol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppol03009
]
X809_31195
Enzymes [BR:
ppol01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
X809_31195
Ribosome biogenesis [BR:
ppol03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
X809_31195
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
AIW40499
LinkDB
All DBs
Position
complement(3504708..3505466)
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AA seq
252 aa
AA seq
DB search
MERLQKILAQAGVASRRKCEELIQAGSVEVNGVVVTELGTKADPDQDMITVKGRPIKTEK
KIYLMMNKPKGVITSASDPEGRKIVSDYLKGVKERVYPVGRLDYDTEGLLLLTNDGEFAN
LLTHPKHHVPKTYVATVKGVPHGTELDKLKKGIVLEDGITAPAEVEYKDVDPNGKESVIQ
ITIYEGRNRQVRRMFEAISHPVIRLKRIAFGDLLLQNLKRGLTRPLTKDEINRLIQLAKS
DNTKKKRTGRGS
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atggaaagattgcagaaaatattggcccaagctggtgtagcttccagacgtaaatgtgag
gagcttattcaggcgggcagcgtggaagtgaacggggttgtcgtaactgaactgggaacg
aaggcagaccctgatcaagatatgattacggtaaagggacgcccgatcaaaaccgagaaa
aaaatctatctgatgatgaacaaacctaaaggagttattacgagtgcttccgatccggaa
ggccgtaaaattgtgtcagactatctgaaaggcgttaaggaacgcgtatatccggtagga
cgtctcgattacgacaccgaaggactgctgttgcttaccaatgatggcgagttcgccaat
ctgctcactcatcccaagcatcatgtgcccaagacatatgtggcaacagtcaaaggcgtt
ccgcatggtactgagctggacaagctgaaaaaaggaatcgtgctggaagatggcattact
gcaccagccgaggtagaatataaagatgtagatccgaatggtaaggagtctgtgatccag
attaccatttatgaaggcagaaatcgccaggtaagacggatgtttgaggccatttcacac
ccagtcatcagacttaagcggattgccttcggagatcttttgctacaaaacttgaagcgc
ggtctgaccagacccctaactaaggacgaaatcaaccgtctcattcaacttgccaaatca
gacaacacgaaaaagaaacggacaggacgggggtcataa
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