Paenibacillus polymyxa CR1: X809_32705
Help
Entry
X809_32705 CDS
T02956
Name
(GenBank) stage V sporulation protein D
KO
K08724
penicillin-binding protein 2B
Organism
ppol
Paenibacillus polymyxa CR1
Pathway
ppol00550
Peptidoglycan biosynthesis
ppol01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppol00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
X809_32705
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppol01011
]
X809_32705
Peptidoglycan biosynthesis and degradation proteins [BR:
ppol01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
X809_32705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PASTA
Motif
Other DBs
NCBI-ProteinID:
AIW40776
LinkDB
All DBs
Position
complement(3889589..3891943)
Genome browser
AA seq
784 aa
AA seq
DB search
MVKRIKLRTLLIGGCITLFFLVLLLKVFWIQVVSGEYWHNLVVNQVERDQVIQPKRGTIT
DRKGNVLATDAPAYTVVVNPSIIQEYDLENEVVAKLHQLLKTPEDELRGHLSAKDKKGNY
LKNREIRNGGWKVDPEVKAQVDTFKEYLKDKYEVIGAVDTVQESKRYYPENKLASHVLGY
QRKDGTAGMGLEAYYNKELSGTAGKLLYQRDRKGVPLQGSESVYEPAQNGKNLKLTIDDT
IQYYIEDAMQEAIAKYNPKTMTVVAADPQTMDVLGMATYPNFNPNTYGSTPLEYFRNNAT
QSIYEPGSTFKIVTLAAAVQEKVFNPNESYQSGMIRVGGWDIRDVSRNWGTLTYLQGVKR
SSNVGFVHLGLDKLGGERLKKYINNFGFGVKTGIDLPSESTGAITFHTQYKSEVATASYG
HGRVQVTPIQQVAAISAIANGGKLMQPHLVKEIMNPDTGEVQTIQPKEVRQVITRESAVQ
TSSYLEQVVSDQEIGTGRLAYIDGYRVAGKTGTATKVVGKVYDHSKDVVSFIGFAPVNDP
KIAVLVVMDEPNKSVGGGTAAAPVFKKIVSQSLQYMGVPKTGTKTNKSGGAVVKTVNLPT
VPTLTGQVKKDAQNALLKQGIAYETVGKGSKIVRQYPEAGVKMKPGQRIYLLTEDSANMT
IPDFTGVSLRDTLQVLTLMKVGVQVSGEGYVVSQKAQMVNGKRIVSVTLQPAKETVTGVK
PEETQDSTNGVAANQTGSATKTEVDTKTESSTTADAGTDAGAPKGGISAVADEKSAAAIK
GEDN
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atggtcaaaagaataaagcttcgcacactgctaatagggggatgtattaccctctttttt
cttgttctgctacttaaggtattttggattcaagttgtgagtggggagtactggcataac
ctggtagttaatcaagtagaaagagatcaggtgattcagcccaagcgtggaaccattacg
gaccgcaaaggaaacgtattggctacggatgcaccggcttatacggtagttgtcaatcct
agcatcattcaggagtatgatttggagaatgaggttgtagctaagctgcaccagttactc
aaaacgcctgaggatgagctgagaggacatctttctgcaaaggataaaaaggggaactac
ttaaaaaatcgcgagattcgtaatgggggctggaaggtagatcctgaggtcaaggcacaa
gtggatacgttcaaagagtatttgaaggataagtatgaagtaattggagctgtggacacc
gttcaagaatccaaacgctattatccggaaaataagctggcttcccatgttcttggctat
caaagaaaagatggcacagcaggtatggggttggaagcttattataataaagagctctcg
gggacggctggaaagcttctgtatcagcgggatcggaagggagttcctcttcaaggatcg
gaaagtgtctatgagccggcacaaaatggtaaaaatttaaagctgacgattgacgatacg
attcagtattatatagaggatgccatgcaggaagctattgcaaaatacaacccgaaaacg
atgactgtagtagctgctgatccccaaacgatggatgttctcggtatggcgacttacccg
aattttaatcccaatacatatgggagtacacccttggaatatttccgtaataatgctact
caatctatctacgagcctggctccacgtttaagattgtcaccttggcagctgcggttcaa
gaaaaggtgttcaatccaaatgaatcctaccaatctggtatgattcgggtcggaggctgg
gatattcgtgacgtaagccgtaactggggaacgttaacctatcttcagggggtcaagcgt
tcaagtaacgtcggtttcgtccatctgggattggataagttgggtggcgaaaggctgaag
aaatatattaataactttggattcggcgtgaaaacaggcattgatcttccgagtgagtct
accggagctattactttccatacccagtacaaatccgaggtggcaacggcttcgtatgga
cacggacgtgttcaggtaacgccaatccagcaggtagctgcaatctcggcaattgctaac
ggggggaagctgatgcaacctcatctggtgaaagaaatcatgaacccagatacaggcgaa
gttcagacgattcaaccgaaggaagtccgccaagtgattactcgggaatcggcagtccag
acaagcagctatctggagcaggtcgtatctgaccaagaaattggtacgggacgccttgct
tatattgacggatatcgtgtagctggtaaaacaggtacagcgacgaaggtcgtcggaaaa
gtatatgaccattcgaaggatgtcgtgtcctttataggttttgcaccagtaaatgatccg
aaaatagctgttttggttgttatggatgaacctaacaaatcagtaggcggcggtacagca
gcagcgcctgtatttaaaaaaatcgtatctcaatcgttgcaatatatgggggttccaaaa
acaggaactaaaacgaataaatcaggtggcgctgttgtaaaaacagtgaatttgccaacg
gtaccaacattaactggtcaggtgaagaaagatgcgcaaaatgcattgctcaaacaggga
attgcctatgaaacggtaggcaaaggctccaaaattgttcgccaatatcctgaagcaggc
gtcaaaatgaaacccggacaacgcatttacttgctgactgaggatagtgccaacatgact
attcctgattttacaggtgtttcgttgcgtgacacacttcaagttctgacccttatgaag
gttggtgtgcaggtaagcggcgaaggttatgttgtctctcaaaaggcgcaaatggtaaat
ggaaagcggatcgtcagcgtgacgcttcagccggccaaagaaacggtgaccggagtgaaa
ccggaggaaacacaggactcgaccaatggagttgcagctaaccagaccggcagcgcaaca
aaaacggaggtcgatactaaaaccgaatccagtactactgctgatgctggaacagacgcg
ggagctcctaagggaggaatatctgctgttgcagatgagaaaagtgctgctgcgattaaa
ggcgaggataactga
DBGET
integrated database retrieval system