Paenibacillus polymyxa CR1: X809_32965
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Entry
X809_32965 CDS
T02956
Name
(GenBank) DNA repair protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
ppol
Paenibacillus polymyxa CR1
Brite
KEGG Orthology (KO) [BR:
ppol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppol03400
]
X809_32965
DNA repair and recombination proteins [BR:
ppol03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
X809_32965
Archaeal homologous recombinant proteins
X809_32965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_29
AAA_21
ABC_tran
MMR_HSR1
Motif
Other DBs
NCBI-ProteinID:
AIW40826
LinkDB
All DBs
Position
complement(3950895..3954290)
Genome browser
AA seq
1131 aa
AA seq
DB search
MKPILLKLAGLQSYRESQEIRFDDLTETGLFGIFGPTGSGKSTLLDAITLAMYGKVERAV
NGTQGIMNHAEDTLSVAFTFELMSAQGPRRYRVERRFKRAGGVSVNNTLSRFIALTEDGE
EVLADKVQDVTRCVEEYIGLKMDDFTRAVVLPQGKFAEFLSLKGSERRQMLQRLFHLEKY
GDQLAQKLSRRVKDNDSALKALEAEQQGLGDASAEALEHVESRLKEAIANAEASRRELER
VSRESEALNKTRELVIELSQRSNELEQLAAQEPGIALLERKLRQATAAEALLPALTDWKE
AIAEAEKRQKTAEEMEVLAATAQEAALVSAQADEQARQALSAEEPKLLLRIDQLEQALQL
ERDTEALRTERERLAAELVQSEQTLAEHAEGLAKEQELQTRGLKRQQELQQELKQNEVRA
DERRMLQEAVQRLQQLEIANEQSREAELEYATQEKRLAQADERLKLTDQETRETEARRSA
LAAQAADGIEALLALEAEITADMSSLASEEEQLRHELRAEELGRLAQHLAAELREGEPCA
VCGSLHHPAPAVVAAHSADAAAPDELHRLRLGLQELRLTLRQQLHEQRSLLAQPATADSG
AAATGEPFTPAAAPAEPRGAAAWAERCTALERAAAELAARAHMLPTEAQALREADAAGQQ
RRIRAAAEQEAAAAALTQARSKREACTTRSEGLRAEWAAQLMDVAPSEAAERYRAMQERD
GRAEELRSRLETSVTFLEGKAARVQQIQQSIIEEDKIIIARRTGLQSKDDSLREKLAQLR
KWVGDGQAASLLEEATSRLLGLKNGAEAAARRRTEAEERKQQAVHASLIARQASDSAEER
RQMAESRWGSRLEASSFATEAEVMVCCLGPEEAARYEREVSLHREREKELSSRLKHVKEQ
LNGATVTEEQWETATAQLRDCRERDEEALQNRAKAERDLEDLQHRHVRWMELESNRIHLR
SEAEKMSKLQSVFRGNAFVEYIAEEQLMQVSQSASRRLRFLTKQRYALEVDSSGGFVISD
DANGGVKRPVSTLSGGETFLTSLSLALALSAQIQLRGQYPLQFFFLDEGFGTLDPELLDT
VITSLEKLHHDQLSVGVISHVPELRARLPRKLVVLPAEQAGGGSRVVMETF
NT seq
3396 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccaatccttctaaaactggcggggttgcaaagctaccgggagtcgcaggaaatt
cgttttgacgatttgaccgaaactggactgttcgggatatttggcccaacgggtagtgga
aaatcaacgctgctggatgccattacgttggctatgtacggtaaagtggagcgggcagtg
aatggtacacaaggcattatgaatcatgctgaggatacattgtctgttgcatttacgttt
gaattaatgtcagctcaagggcctcgtcgttaccgtgtagaacgacgtttcaaacgtgct
ggaggcgtatcggttaataatacgcttagccgttttattgcgttaacagaggatggcgaa
gaagtacttgccgataaggtgcaggatgtgacgcgctgtgtggaggagtatatcggccta
aaaatggacgattttacacgagctgtcgtattgccgcagggaaagtttgcggaattcttg
tccttaaaaggcagtgaacgcagacagatgctacagcgtttgttccatctggagaagtac
ggagatcaacttgcacagaagctaagccgtcgtgtgaaagataacgatagcgcactgaaa
gcgttagaggcggagcagcaagggctgggggatgcgagtgctgaagcgcttgaacatgta
gagtcgcgtctcaaagaggcgattgccaatgcagaagcttcgcgtcgcgagctagagcgt
gtctcacgtgaatcggaggcgctaaacaaaacccgtgagctggtcatcgagctcagccaa
agatcgaacgagctggagcagttggcagcacaggagccgggcattgctttgctggagcgc
aagcttcgacaagcaactgcagccgaggcattgctgcctgcgctgacggattggaaggaa
gccattgctgaagcggaaaaacggcaaaagactgccgaagaaatggaagtcctggccgct
accgcgcaggaggctgcgcttgtgtctgcgcaagcagatgaacaggcccggcaagcactc
agtgccgaagaaccgaagctattgcttcggatcgaccaactagagcaggcgcttcaactg
gagcgtgatacggaagcgttgcggaccgaacgggaacgtctggcggccgagcttgtgcaa
agcgaacaaacccttgctgaacatgcagaaggactcgcaaaggaacaagagctacagacg
cgaggcttgaagcgacagcaggagcttcaacaagagctaaagcaaaatgaagtgcgggca
gatgagcggcgtatgctgcaagaggccgtgcaacggttgcaacagctggaaatcgcgaat
gagcaatcgcgtgaagcagaactggagtacgccactcaggagaaacggcttgcgcaagct
gacgaacgtctaaagctgacggaccaggagacacgggagacggaggcacggcgttctgcc
cttgctgcacaggcagctgatggcatcgaggcattgctggcgttggaggcagagatcacc
gccgatatgtcgtcactggcctccgaggaagagcaactgcgccacgagctccgtgctgag
gagctgggccgtctcgctcagcatctcgctgccgagttgcgcgaaggcgagccgtgcgca
gtgtgcggctcgctgcatcaccccgcgcctgccgtcgtcgcggcgcatagcgcggatgcc
gctgcgccagatgagctgcaccgcctgcggctcggtttgcaggagctgcgccttacactg
cgccagcagttgcacgagcagcgcagcttgctggcacagcccgccaccgcagacagcggc
gctgccgccacgggcgagcctttcacgcctgcggcagcgccagcagagccacgcggtgcc
gccgcttgggcggagcgctgcacggcgctggagcgtgctgcggcagaactagccgcacgt
gcgcatatgctgcctaccgaggcacaggcgctgcgcgaggcagacgccgccggacagcag
cggcgtatccgtgctgccgccgagcaggaggcagcagctgcagcgctgacgcaggcacgc
agcaagcgcgaggcatgcaccacgcgcagcgaggggctgcgcgccgaatgggcggcgcag
ctaatggatgttgctccaagcgaagcggcagagcgttaccgcgccatgcaggagcgcgac
gggcgtgcggaagagctgcggtcccggctggagacgagtgtgaccttcctcgaaggaaag
gcggcgcgtgttcaacagatacagcagagtatcatcgaggaggacaaaatcattattgcc
cgccgtacagggctccaaagcaaagatgattcgcttcgtgaaaagctagcacagctccga
aagtgggttggagatggccaagcggcttcattgctggaagaagcgacctcgcgactgttg
ggactgaaaaacggagctgaagccgcggcacgccgccgtaccgaagcggaagaacgcaag
cagcaagccgttcatgcttcactgattgcccggcaggcctccgactcggcagaagaaaga
cggcagatggcagagtcccgttggggcagccgtctggaagcatcctccttcgctacggaa
gcagaggtcatggtatgctgcctgggaccggaagaagccgcacgctatgagcgtgaagtg
agtttgcatcgagaacgggaaaaagagctgtcttcccgcttaaaacatgtcaaagagcag
ctgaatggagcaacggtaacagaggaacagtgggaaacggccactgcacagctacgtgat
tgccgtgaacgcgacgaagaggcgcttcagaatcgcgcgaaggctgagcgtgatttagag
gacttgcagcatcgacatgtccgctggatggagctggagtccaatcgtatacatttgcgt
agcgaagcggaaaaaatgtccaagctccagtctgtttttcgcggcaatgcctttgttgaa
tatattgccgaggagcagctcatgcaggtcagtcagtcggcttcacgccgcctgcgtttt
ctgaccaagcagcgttacgcgctagaggtagattccagcggtggatttgtcattagtgac
gatgccaacggtggggtcaaacgtccggtatcgaccttgtccggtggcgaaacgttcctg
acctccttgtcgcttgcgcttgcgctgtcggctcaaattcaattgcggggccaataccct
ctgcaatttttctttctggatgaaggctttggaacgttggaccccgagttgcttgacaca
gtgatcacctcactggaaaagctgcaccacgatcaattgtctgttggtgtgattagtcat
gtgcctgaactacgggcccgtcttccgcgcaagctagttgttctgccagcagagcaggct
ggaggcggctcacgtgtggttatggaaactttttga
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