Paenibacillus polymyxa CR1: X809_33110
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Entry
X809_33110 CDS
T02956
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
ppol
Paenibacillus polymyxa CR1
Pathway
ppol03030
DNA replication
ppol03430
Mismatch repair
ppol03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
X809_33110
03430 Mismatch repair
X809_33110
03440 Homologous recombination
X809_33110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppol03032
]
X809_33110
03400 DNA repair and recombination proteins [BR:
ppol03400
]
X809_33110
Enzymes [BR:
ppol01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
X809_33110
DNA replication proteins [BR:
ppol03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
X809_33110
DNA repair and recombination proteins [BR:
ppol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
X809_33110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
iSTAND
Motif
Other DBs
NCBI-ProteinID:
AIW40853
LinkDB
All DBs
Position
complement(3990909..3991940)
Genome browser
AA seq
343 aa
AA seq
DB search
MDVKTASKAIRKGDISPVYLLYGSEKYQMKQFVEMLKEKVVEEEHRDFAIIPYDLTETPI
EVVVEEAETAPFLVPKKLIIVRDTSVFAAGKDSGKIEHRLETLLTYMDNPTDYSVIVFTV
QAEKLDERKKIVKKLKSDASVIAFAPMGGDDLIAWIHKRAGEREVQLAAGAAESLIQFTG
TGLQSLAAEIDKLCLYAGAQGTISSADIESLVPRNTEQNVFAMVEDLANLRLDKALSIFY
ELLKQKEEPIKIAALITRQFRIMLQVKELAGQSYSQQQIASQLSLHPYGVKVAGDQARRF
RPEQLRQLLYELGELDYHMKTGVVDKVLGLELFLMKMGAGASI
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggatgtaaaaacagcttctaaggctattcgcaaaggcgatatttcgccagtgtatttg
ctatacggcagtgaaaaatatcaaatgaagcagtttgttgagatgcttaaagagaaagtg
gtggaagaggagcatcgtgacttcgccatcattccttatgatttaaccgaaacgccaatt
gaggtggttgtggaagaggcggaaacagcgccttttctggtgccaaagaagctgattatt
gtacgggataccagtgtatttgcagcaggcaaagatagcggtaagatagagcaccggctt
gagacgctgttgacttatatggataacccgactgactatagcgtcatcgtttttacggtt
caggctgaaaagttggatgaacggaaaaagattgtcaaaaagctgaaaagtgatgcttcg
gttattgcttttgctccaatgggtggagatgatcttatagcttggatccataagcgtgca
ggagaaagagaagtgcaattggctgcaggagctgctgaaagcctcattcaattcacaggt
accgggctgcaatccttggctgccgagatagacaagctctgcttgtacgcaggagcacag
ggaacgatctcatccgctgatatagaatccctggtgcctcgtaacacagagcaaaacgta
tttgcgatggttgaggatctggctaatttgcggctggataaggcgcttagtattttttat
gagttgcttaagcaaaaagaggaaccgatcaagattgccgctttgatcacgcgacagttc
cgtattatgttgcaggtcaaagagctggcaggtcaaagctattcccagcaacaaattgcc
agtcagcttagtttgcatccttatggggtgaaagttgcaggggaccaagcgcggaggttc
cgccctgagcagctgcgtcagcttctctacgaattgggcgagctggattatcatatgaaa
acaggtgtcgttgacaaggtactgggactggagctatttttgatgaaaatgggtgcgggg
gcttcaatctaa
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