Paenibacillus polymyxa CR1: X809_34585
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Entry
X809_34585 CDS
T02956
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ppol
Paenibacillus polymyxa CR1
Pathway
ppol00040
Pentose and glucuronate interconversions
ppol01100
Metabolic pathways
ppol02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ppol00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
X809_34585
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
X809_34585
Enzymes [BR:
ppol01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
X809_34585
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GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
AIW41107
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Position
4307396..4308679
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AA seq
427 aa
AA seq
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MKKRFSLGIAAALLFTTLAPIGAPAHAASDIGKETLGSKNGWASFSTGTTGGATATTSNI
FTVTNRKQLVDALGKNSNSTPKIIYVKGTINANVDDNNKPLGLNDYKDSKYEFDAYLKAY
DPSTWGKKAPSGTLEKAREASQKNQASRVVIEIPSNTTIVGLGSDAVINGANFQLKKGTD
NVIIRNIEFQDAYDYFPQWDPTDGSTGNWNSEYDSITVNGATHVWVDHNTFNDGSHPDSQ
NGTFYGQEYQHHDGLLDVINQGDLVTVSYNHFYDHDKSSIIGNSDSKTADEGALRVTLHH
NYYENTVQRTPRVRYGQVHLYNNYYTGDVKRSEYPSLYIWGAGKSSKIFAENNVIDVAGL
TAAKIVTVFGGTALSDTGTILNGQAVNAGSSAGLSSSVGWKPSLNDKISPSASVKAEVTS
QAGSGKL
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagagattttcactcggaatcgcagcggctctactgttcactactctggctcct
ataggtgcacctgctcatgcagccagcgatattggcaaggagacgctcggcagcaaaaac
ggatgggcatccttttctacaggcacaacaggtggagctacggcgactacctccaatatt
ttcaccgtaacgaatcgcaagcaacttgtcgatgctttgggcaaaaacagcaatagtacg
cctaaaatcatttatgtcaaaggcacgatcaacgccaacgtcgatgacaataataaaccg
ttaggattgaacgactacaaggactctaaatatgagtttgacgcctacctcaaagcgtat
gacccgtccacatggggtaaaaaggccccgtctggcacattggaaaaggcacgtgaggct
tcacaaaaaaatcaggccagtcgtgtcgtcattgaaattccgtccaatactacgattgtc
ggtctgggaagcgatgcggtcattaatggcgcaaacttccaactaaaaaaagggacagac
aacgttattatccgtaatatcgaattccaggatgcctacgattattttcctcaatgggac
ccaacggacggcagtacaggcaattggaattcggaatatgacagcattacagttaacggc
gccacacatgtatgggtagaccacaataccttcaatgatgggtctcaccccgatagccaa
aatggcaccttttacggccaagaataccagcatcatgatggacttctcgatgtgattaac
caaggcgatctggttactgtttcttacaatcatttttacgatcatgataaatcatcgatt
attggcaacagcgacagtaaaacagcagatgaaggggctttacgtgtaactctgcatcac
aactattatgaaaacacggtacaacgcacaccacgcgtgcggtatggacaagtccatctg
tacaacaattactatactggtgatgtaaaacgctccgaatatccttcactgtatatatgg
ggcgcaggtaaatcctccaaaatcttcgccgaaaacaatgtcattgacgttgccggttta
actgcagctaaaatcgtgactgtctttggaggaactgccctgtcagatacgggcacaatc
ctgaatggacaagctgttaacgcaggctccagcgcgggtcttagctcctctgtaggctgg
aaaccatcgctgaacgataaaatctccccatccgccagtgtgaaggcagaagtcacttcc
caagccggttccggtaagctgtaa
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