Paenibacillus polymyxa CR1: X809_35285
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Entry
X809_35285 CDS
T02956
Name
(GenBank) ATP-dependent DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
ppol
Paenibacillus polymyxa CR1
Pathway
ppol03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
X809_35285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppol03400
]
X809_35285
Enzymes [BR:
ppol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
X809_35285
DNA repair and recombination proteins [BR:
ppol03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
X809_35285
RecFOR pathway proteins
X809_35285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
TIP49
AAA_16
AAA_14
nSTAND3
AAA_22
AAA_18
NB-ARC
NTPase_1
RNA_helicase
TsaE
Resolvase
Bac_DnaA
AAA_3
DUF815
Rad17
AAA_24
Sigma54_activ_2
Sigma54_activat
AAA_2
AAA_17
AAA_28
AAA_25
ABC_tran
NPHP3_N
AAA_33
NACHT
bpMoxR
IstB_IS21
ATPase_2
Parvo_NS1
RsgA_GTPase
Torsin
Motif
Other DBs
NCBI-ProteinID:
AIW41235
LinkDB
All DBs
Position
complement(4487155..4488162)
Genome browser
AA seq
335 aa
AA seq
DB search
MDDRIISANLMMEDQTAELSLRPRYLNEYIGQNQVKENLKVYIEAAKMRKEALDHVLLYG
PPGLGKTTLANIIANELGVNLRTTSGPAIERPGDLAALLTNLQEGDVLFIDEIHRLHRTV
EEVMYPAMEDFALDIMIGKGPSARSVRLDLPPFTLIGATTRAGLLSAPLRDRFGVISRLE
FYTTDELAYIVSRNADIMEIEIVGDAAEEIALRSRGTPRIANRLLKRVRDFAQVAGDGII
HSELAAEALKRLQIDPLGLDEIDHKMLKAMIHSFRGGPVGLDTIAATIGEESQTIEDVYE
PYLLQIGLLQRTPRGRTVTPAAYGHLGIPMPTDPR
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggatgaccggattatttccgccaatttgatgatggaagaccagacggcggagctaagc
cttcgcccccgttatctaaatgaatatatcggccaaaatcaggttaaggaaaatctgaaa
gtatatattgaagcggccaaaatgcgtaaagaagcgttggaccatgtactgttgtacgga
ccgccggggttgggtaaaacaactcttgctaacattattgccaatgagttgggggttaat
ctgcgtacaacttcaggtcctgcaattgaaagaccgggagatttggcagcattgctgacc
aatcttcaagagggtgatgttttgttcattgatgagattcatcgccttcatcgtacggtg
gaagaagtcatgtatcctgcaatggaggattttgcgctggacattatgattggtaaaggc
ccgagtgcacgctcggtccgtctggatttgccaccctttacccttataggggccactacg
cgcgctgggctgctctctgcgccattgcgtgatcggtttggtgttattagtcgattagag
ttttatacgacagacgagctggcttacatcgtgtccaggaacgcggatattatggagatt
gaaattgtcggggatgcggcagaggaaatcgcattgcgttcacgggggacaccgcgtatt
gccaaccgactgttaaaaagggtgcgtgattttgcccaggttgctggagacggtattatt
cattctgagttagctgctgaggcgctaaagaggcttcaaatagatccactcggacttgat
gaaattgatcataaaatgcttaaggccatgattcattcattcaggggcgggcctgtagga
ttggacacaattgctgcgaccattggggaggagagccagacaattgaggatgtgtacgag
ccctatttgttacaaattggccttttacaaagaacacctcggggacgaacagtgactccg
gcggcatatggccaccttggaattccaatgccaacggatccacggtga
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