Paenibacillus polymyxa CR1: X809_37230
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Entry
X809_37230 CDS
T02956
Name
(GenBank) RNA polymerase sigma70
KO
K03090
RNA polymerase sigma-B factor
Organism
ppol
Paenibacillus polymyxa CR1
Brite
KEGG Orthology (KO) [BR:
ppol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppol03021
]
X809_37230
Transcription machinery [BR:
ppol03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
X809_37230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
HTH_23
Sigma70_ECF
HTH_38
HTH_50
HTH_Tnp_ISL3
GerE
Cyclophil_like2
HTH_29
Lyase_1
KORA
DUF1492
TnsD
HTH_28
HTH_24
MarR_2
HTH_10
Phage_antitermQ
ELMO_ARM
Motif
Other DBs
NCBI-ProteinID:
AIW41564
LinkDB
All DBs
Position
complement(4891133..4891906)
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AA seq
257 aa
AA seq
DB search
MNEKVTPPESMDEAVGLIWEYQQTKDNEIATVLIRKYEPMVKMAAGKISRNRPDLYEDLY
QTGQMALIRLLQQYDISLGIPFEPYAMKSMLGHMKNYLRDKSWYIQVPRRIKEKGALVQH
AIDELTVKLERSPNVDEIATYLDLTVEETIEVLAGRECYHYVSLDSPLSQEESAATLGEL
ISSDANDYDTVEKRMDLQQALSQLKEQEQKVLLLAFQDGQSQRAIAQTLGVSQMSVSRIQ
KRATEKLKQIMSNSSIS
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaaaggtaactcccccggagtcgatggatgaagccgttggtctaatctgggag
taccagcaaacaaaagataacgagattgctaccgtgctgatccgtaagtatgagccgatg
gtcaagatggctgctgggaagatctcccgtaaccgtccggacttatacgaggatttatat
cagaccggtcagatggctttgatacgtctgcttcagcaatacgatatcagcttgggtatc
ccatttgaaccgtatgctatgaaaagtatgctgggacatatgaaaaattatttgcgcgac
aaatcctggtacatccaggttcctcgccgcattaaagaaaagggtgcgcttgttcaacat
gctattgatgaactaaccgttaaattggaacgttcacccaatgtggatgagattgcaacc
tatttggatcttaccgtggaagaaacgattgaggtgcttgcaggccgtgagtgctatcac
tatgtttcactggactcgcctttatcccaggaagagagtgcagctacattaggcgagctc
attagctcggatgctaacgattatgacactgtggaaaaacgaatggatttgcagcaggct
ttaagccaactgaaggagcaggaacaaaaggtgcttcttctggcatttcaggacggtcaa
tctcaacgtgcgattgcacagacgttgggcgtatcgcagatgagcgtttcccgtattcag
aagcgggcaacggaaaagctgaagcagattatgtctaattcctctatttcatga
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