Paenibacillus polymyxa CR1: X809_39110
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Entry
X809_39110 CDS
T02956
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ppol
Paenibacillus polymyxa CR1
Pathway
ppol03420
Nucleotide excision repair
ppol03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
X809_39110
03430 Mismatch repair
X809_39110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppol03400
]
X809_39110
Enzymes [BR:
ppol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
X809_39110
DNA repair and recombination proteins [BR:
ppol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
X809_39110
MMR (mismatch excision repair)
Other MMR factors
X809_39110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
Terminase_6N
DEAD
ResIII
GBS_Bsp-like
Motif
Other DBs
NCBI-ProteinID:
AIW41878
LinkDB
All DBs
Position
complement(5305362..5307686)
Genome browser
AA seq
774 aa
AA seq
DB search
MQSIDIHEAVARLNPPQRQAVEAVDGPLLIMAGAGSGKTRVLTHRIAYLIATRKTAPWGI
LAITFTNKAAREMQDRVSKLIGPQGRDVWVSTFHSMCVRILRRDIERIGFTSNFSILDST
DQLSVIRSCMKDLNIDTKKFEPKAVQSMMSTAKNELVTPEMYERKIGDYFEGIVAKVYTK
YQQRLKNNNSLDFDDLIMATIQLFKEVPEVLDFYQKKFQYIHVDEYQDTNRAQYMLCKML
ADKHHRICVVGDSDQSIYRWRGADISNILNFEEDYPEARTILLEQNYRSTSNILNAANEV
IGQNTGRKPKKLWTDKEGGAKIKVYRADSEHDEGYFIASEIHKNINAGKTYSHHAILYRT
NAQSRVVEEILIKSDIPYQIVGGIKFYDRKEIKDLLAYLRLLSNPDDDISLIRIINVPKR
SIGDTTVGKLQAAAAERGVSIFRVLQVVDDLGFAGRTRNALVEFYDMIEGLSRMVDYLSV
TELTEKMLETTQYRLELQNENTLESRSRLENIDEFLSVTMEFEKGAEDKSLVSFLTDLAL
IADIDSMNDDEEEQSDAVVLMTMHSAKGLEFPIVFIVGMEEGVFPHSRAFLDNEELEEER
RLAYVGITRAEEQLFLTCAQMRTLFGRTTANPPSRFLEEIPDELKEDTIIKRDRYRRSGN
VGGSYGGRGLNKGSGSNFGGERSFDTMSRSGSSASASPRVTVTTSSSAKATPAASAGGPS
IFAAGDKVQHGKWGIGTIVAVKGTGNDMELQIAFPAPVGVKRLLAGFAPITKVE
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgcaatcaatagatatacatgaggcggtagctcgccttaatccgcctcagcgtcaggct
gtggaggcggtagatggtccgctgctgattatggctggcgcaggcagtggtaaaacacgg
gtgctcacgcaccgaatagcttacctcatcgcgacccgcaagacggctccatggggcatt
ttggcgattacctttacgaacaaggctgcacgtgaaatgcaagatcgcgtatccaagctg
attggcccacagggaagagatgtttgggtatccaccttccactcgatgtgtgtgcgtatt
ttacgtcgggatatcgagcggattggcttcacctccaatttcagcattttggattctacg
gatcaattgtctgtcattcggagctgcatgaaggatctgaatatagacaccaaaaagttt
gaacccaaagcggttcagtctatgatgagtacggctaaaaatgaactggtcactcccgaa
atgtatgagcgcaagattggtgactattttgaggggattgtggcgaaggtatataccaag
taccaacaacggctcaaaaacaacaactctcttgattttgatgatttgatcatggcaacg
attcagctatttaaagaagtacctgaggtactggatttctaccagaagaaatttcaatac
attcatgttgatgaatatcaggatacgaaccgtgcgcagtacatgctgtgcaaaatgctg
gccgacaagcatcaccggatttgcgtagtaggtgacagtgaccaatccatctatcggtgg
cggggggcggatattagcaacattttgaattttgaagaggactacccggaagcgcgcacc
attttgctggagcagaactaccggtccacctcaaatattctcaatgctgccaacgaagtt
attggtcaaaatacaggccgcaagccgaagaaactatggactgacaaagaaggcggagcc
aagattaaagtttaccgtgctgactccgagcatgatgagggctactttatcgcctcagaa
attcataagaatattaatgcgggcaaaacctatagccatcatgccattttataccgtacg
aatgctcagtctcgggttgtcgaggaaattttgattaaatcggatattccttaccagatc
gtgggcggtatcaagttctatgatcgtaaagaaattaaggatttgctggcgtatcttcgc
ctactctccaatcctgacgacgacatcagcttgatccgaatcattaatgtgccaaaacga
agcatcggagacacaaccgtcggtaaattgcaggcagctgcagcggaacggggagtttcg
attttccgtgtccttcaagttgtagacgatttgggctttgcaggacgtacacgcaatgcg
ttggtagagttttacgatatgatcgaaggtttaagtcggatggtagactacctgtcggtt
accgagttaacagaaaaaatgttggaaaccacccaatatcgattggagctgcaaaacgag
aatacacttgagtcacgctcgcgcttggagaatattgatgagttcctgtcggtaaccatg
gaatttgaaaaaggagcggaagacaagtcactcgtctccttcctgaccgaccttgctctg
attgccgatattgattccatgaatgacgatgaagaagagcaaagtgatgcggttgtattg
atgaccatgcatagcgccaaaggactggagtttcctatcgtatttattgtcggtatggag
gagggagtattccctcatagtcgtgcttttctggataacgaagagctggaggaggagcgc
agattggcgtatgtcgggattacccgtgcagaggagcaactgttccttacatgcgcacag
atgcgcactttgtttggccgcaccacagctaacccgccttcccgctttctcgaagagatt
ccagatgagttaaaagaggatacgatcattaaacgtgaccgctaccgccgttcaggcaat
gtaggcggatcttatggtgggcgcggactgaataaaggtagtggcagcaactttggtgga
gaacgctcgtttgatacgatgagccgcagtggttcgtccgcttccgcgtcaccccgcgta
acagtaacgacatcttcatctgcgaaagcaactccggctgcttcggcaggaggcccctcc
atttttgctgctggagacaaggtacagcatggcaaatgggggattggaaccattgtcgct
gtaaaaggaacgggtaatgatatggagcttcaaattgctttcccggctccagtaggggtt
aaacgactgctggctggctttgcaccaattacaaaagtagaataa
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