Paenibacillus polymyxa CR1: X809_42035
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Entry
X809_42035 CDS
T02956
Name
(GenBank) peptidase M15
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
ppol
Paenibacillus polymyxa CR1
Pathway
ppol00550
Peptidoglycan biosynthesis
ppol01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppol00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
X809_42035
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ppol01002
]
X809_42035
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppol01011
]
X809_42035
Enzymes [BR:
ppol01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
X809_42035
Peptidases and inhibitors [BR:
ppol01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
X809_42035
Peptidoglycan biosynthesis and degradation proteins [BR:
ppol01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
X809_42035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
Beta-lactamase2
Beta-lactamase
AlgF
Motif
Other DBs
NCBI-ProteinID:
AIW42424
LinkDB
All DBs
Position
complement(5996961..5997902)
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AA seq
313 aa
AA seq
DB search
MMKKHWLRWAIVVPVLIILIFITLGPRLLIGKPNVDAEAAVLMDMHTGELLMDVNGDTPM
PSANMSKLMTELLVLEDIRAGRLGWNDEVRISRYASTVGGVNLSLRYGERMTVSELFQSM
VVYSANDAAVALAERSAGNESAFVKRMNGKAAQIGLSSDSRFSNASGAGQSELGPNHPED
IRGETKMTASDTAKLASYLITSHPEILRTSSRTQMELKDKGIYISNTNWMLPSLAGPYSY
AGTDGLKAGYTSDAGYCFTGTAEQHGRRLVAVVLGAPSKEERFEQTRRLFDYGFALSTSF
PVRLQNLVKLAPH
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaaaaacattggttacgttgggctattgtcgtcccggtacttattatattgatt
tttattacgcttggaccccgcctgttgatcggaaagccgaatgtggatgcagaggctgcg
gtgctgatggacatgcatactggggaattactgatggatgtgaacggcgatacgcctatg
ccttccgcaaatatgtccaagctcatgactgagctattggtgctggaggatattcgggcc
ggacggttaggctggaatgatgaagtgcgaattagccgttacgcgagtacggtgggcggt
gtgaatttgtccctccggtatggtgaaaggatgaccgtatccgaattgttccagagtatg
gttgtgtattcagcgaatgatgccgctgtcgcgttagcggagcgttcagcagggaatgaa
tcagcttttgtgaagcgtatgaatggaaaagctgcccaaatcgggttgtcatccgatagt
cgcttcagcaatgcctctggagcagggcagagtgaattggggccgaatcaccctgaggat
attcggggagaaacgaaaatgacagcaagcgacacggcgaagttggcctcctatttgatt
acgtcacacccggagattttgagaacgtccagccgtacgcagatggagttgaaggataaa
ggcatctacattagtaatacgaactggatgctgccttccttggctggaccgtactcttac
gcgggaacggacggactgaaagcaggatacacaagcgatgctggatactgcttcacgggt
acagctgagcagcatggaagacggctagttgctgtggtgctgggtgcaccgagcaaggag
gagcgttttgagcagacacggaggttgttcgattatggttttgccctgtcgacttctttc
ccggtgcgactgcaaaatttggtgaaactggccccgcattaa
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