Psychroserpens ponticola: MUN68_000580
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Entry
MUN68_000580 CDS
T09473
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ppon
Psychroserpens ponticola
Pathway
ppon03030
DNA replication
ppon03410
Base excision repair
ppon03420
Nucleotide excision repair
ppon03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MUN68_000580 (polA)
03410 Base excision repair
MUN68_000580 (polA)
03420 Nucleotide excision repair
MUN68_000580 (polA)
03440 Homologous recombination
MUN68_000580 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppon03032
]
MUN68_000580 (polA)
03400 DNA repair and recombination proteins [BR:
ppon03400
]
MUN68_000580 (polA)
Enzymes [BR:
ppon01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MUN68_000580 (polA)
DNA replication proteins [BR:
ppon03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MUN68_000580 (polA)
DNA repair and recombination proteins [BR:
ppon03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
MUN68_000580 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MUN68_000580 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_2
RNase_H_2
HHH_5
HHH
Imm51
ACS_CODH_B_C
Motif
Other DBs
NCBI-ProteinID:
WCO02002
LinkDB
All DBs
Position
complement(128781..131642)
Genome browser
AA seq
953 aa
AA seq
DB search
MSDQKRLFLVDAYALIFRGYYAFIKNPRINSKGEDTSAIMGFMNSLLDVIKRERPDHLAV
CFDKGGSADRVEMFEAYKANRDETPEGIKTAVPYIYEILKAMHIPIMVKEGYEADDVIGT
LAKKAEKEGYQTFMVTPDKDFAQLVSENIFMYRPMFGGGYETWGIPEVQKKFEVTDPLQV
IDFLGMMGDASDNIPGLPGVGEKTAKKFLAAYGSMENLLANTHELKGKMKEKVEANSELG
MLSKKLATIMLDVPVNFNEKDFEMSEPDIPKVTEIFQELEFRRLIDNFNKTFSAETVAPK
VETTQSTEAKVSDKTETKTTPKEVKSAGAGQFSLFGGEDNSAEATPSNTRKTAENTSHFY
QSIASGMATKLFVKNLMNQTSVCFDTETTGLNSLTAELVGISFSWETGKGFYVPFPEDKN
EAQKLIETFRPFFENENIQKIGQNLKYDIKVLAKYNIEVKGKLFDTMLAHYLINPDMRHN
MDVLAETYLNYTPISIVDLIGKKGKNQLSMREVPLEKQTEYAVEDADITLQLKEHFEKEL
GEANTQKLFDDIEIPLLRVLATMELEGINLDKGFLNSLSEQLNTDIEALVKNIYEAAGEE
FNIASPKQLGIILFEKLKLVDKPKKTKTGQYKTGEDILSYLAKDHEIIQNILDYRGLAKL
KSTYVDALPLQVEESTGRVHTDYMQTVAATGRLSSNNPNLQNIPIRTERGRQVRKAFIPR
NEDYTLLAADYSQIELRIIAALSKEETMIEAFKNGEDIHASTASKVFGVPISEVTREQRS
NAKTVNFGIIYGVSAFGLSNQTDLSRGEAKELIDTYYETYPKLRAYMSEQVDFARDHGYV
QTVLGRRRYLKDINSRNAIVRGAAERNAVNAPIQGSAADIIKIAMINIHNKMKAGDYKSK
MLLQVHDELVFDVYKPELEELSSLIKTEMEGAFKMEVPLDVEIDTGLNWLEAH
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatcaaaaacgcttatttctagtagatgcttacgcacttatttttcgaggttat
tatgcctttataaagaatccaagaatcaattccaaaggcgaagacacgtctgctattatg
ggctttatgaactccttattagatgtcataaaacgtgaacgtcctgatcatttagcggtt
tgttttgataaaggtggtagtgcagatcgtgtagaaatgtttgaggcttacaaagccaat
cgcgatgaaactcctgaaggcataaaaactgctgtgccttatatatatgaaattttaaaa
gccatgcacattccaattatggtgaaggaaggctatgaagccgatgatgtgattggaacc
ttggcaaaaaaagctgaaaaagaaggctatcaaacctttatggtgacaccagataaagat
tttgcgcagctcgtttctgaaaatatttttatgtacaggcctatgtttggaggtggttat
gaaacttggggaattcctgaagttcagaagaaatttgaagtcacagatcctttacaagtg
attgactttttaggtatgatgggagatgcttccgataatattcctggtcttccaggagtt
ggcgaaaaaaccgctaagaaatttttagcagcttatggaagtatggaaaacctgttagcc
aacacacatgagctaaaaggaaaaatgaaagaaaaggtcgaagcaaatagtgaattgggt
atgctttcaaagaagttagccacgataatgttagatgttcctgtaaactttaatgaaaaa
gattttgaaatgtcggaaccagatattcctaaagtcacagaaatttttcaagaactagag
tttagacgattaattgataattttaataaaacattttctgcagaaacggttgcgcctaag
gtagaaacaacacagtcaactgaggctaaagtttcagataaaacggaaacaaaaacaaca
ccaaaggaagttaaatcggctggtgctggacaatttagtttatttggaggtgaagacaat
tccgcggaagcgacaccaagtaacacaagaaaaacggctgaaaacacatcgcatttttat
cagagtatcgcttcaggaatggcaaccaaactattcgtgaaaaacctgatgaatcaaacg
tctgtatgctttgatactgaaaccactggacttaattcgttgactgctgaactcgtaggt
atttcattttcttgggaaacaggtaaaggattttatgtgccatttccagaagacaaaaat
gaggctcaaaaattgattgaaaccttccgaccattttttgaaaatgaaaacatccaaaaa
attggtcagaatttaaaatacgacatcaaagtcttagcaaaatataatattgaagtcaaa
ggaaaactcttcgacactatgctagcgcattatttgattaatccagatatgcgacataat
atggacgtgttggctgaaacgtatttgaactatactccaatttcaatagtagatcttatt
ggcaaaaaaggcaagaatcaattatcgatgcgagaggttcctttagagaaacaaaccgaa
tatgctgttgaagatgctgatatcacgcttcagttaaaagaacatttcgagaaagaatta
ggtgaagccaatactcaaaagctatttgatgacatcgaaattccgttgctacgtgtttta
gcgactatggaattagaaggtattaatctagataaaggttttttaaattctttgtctgaa
caacttaatacagatattgaagcacttgtaaaaaacatttatgaagctgcaggtgaagaa
ttcaatattgcctcaccaaagcaattaggtatcattttatttgaaaaactaaaattggtt
gacaagccaaaaaagacaaaaacgggtcagtataaaacaggagaagatatcttgtcttac
ttagcgaaagatcatgagattattcaaaatattttagattatcgtggactcgcaaaactg
aaaagcacttatgttgatgctttaccacttcaggttgaagaaagtacaggcagagtacac
acagattatatgcaaaccgttgctgcaacaggacgattgagtagtaataatccaaattta
caaaacattccaatcagaacagaacgtggacgacaagttcgtaaagcatttatccctaga
aacgaagactacactttactagctgccgattattctcaaatagaacttagaattattgct
gctttaagcaaagaagaaaccatgattgaagcttttaaaaacggagaagatattcatgcg
tcgactgcttcaaaagtatttggtgtgcctatttctgaagtcactcgtgagcaacgtagt
aatgccaaaaccgtcaacttcggaatcatttatggagtctctgcttttggattgagtaac
caaaccgatttatctcgaggtgaagccaaagagcttattgatacctattatgaaacctat
ccgaaattgcgagcttacatgagtgagcaagtcgattttgcaagagatcatggttatgta
caaaccgttttaggtcgacgtcgttatttaaaagacatcaattctcgtaatgcgattgtt
cgtggagcagcagaacgaaatgctgtgaatgcgcctattcaaggctctgctgcagatatt
attaaaattgctatgattaacattcataacaaaatgaaagctggtgattataaatctaaa
atgctcttgcaagtgcacgatgaattggtatttgatgtttataaaccagagcttgaagaa
ctctcttcgcttataaaaacggaaatggaaggtgcttttaaaatggaggttcctttggat
gttgaaattgatactggtttgaattggttggaggcgcattaa
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