Psychroserpens ponticola: MUN68_005630
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Entry
MUN68_005630 CDS
T09473
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
ppon
Psychroserpens ponticola
Pathway
ppon03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MUN68_005630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppon03019
]
MUN68_005630
03009 Ribosome biogenesis [BR:
ppon03009
]
MUN68_005630
Enzymes [BR:
ppon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MUN68_005630
Messenger RNA biogenesis [BR:
ppon03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MUN68_005630
Ribosome biogenesis [BR:
ppon03009
]
Prokaryotic type
rRNA helicases
MUN68_005630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
TssO
Motif
Other DBs
NCBI-ProteinID:
WCO02970
LinkDB
All DBs
Position
complement(1264376..1266319)
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AA seq
647 aa
AA seq
DB search
MSTFKELGLNEDLIAAIDDLGFKNPSDVQAKAIPILLEEDTDLVALAQTGTGKTAAFGFP
MLQKINVDSRTTQGLILSPTRELCLQITNELKLYGKYCKGLNVVAIYGGASIQDQARAVK
RGAQIIVATPGRMKDMISRRMVDISKIEYSVLDEADEMLNMGFYEDITDILSHTPDDKNT
WLFSATMPKEVSNIARKFMDSPIEITVGNKNESTSQVSHEYYLVNARDRYQALKRLSDAN
PDIFSVIFCRTKRDTQKVAENLIEDGYSAGALHGDLSQNQRDMVMKSFRNKQIQMLVATD
VAARGIDVDDITHVINYQLPDEAEIYTHRSGRTGRAGKTGISMVIVSKSEVRKIKSIERI
IKKEFEKKEIPDGMEICEVQLMSLANKIHNTEVNDEIDKHLTSINELFEDTDKDELIKKF
FSVEFTRFYNYYQKSKKLNVPSSSRDSEGDSGGRGYGGSKNESRYFINVGRKDGYDWMKL
KDFLKEVLELGRDDVFKVDVKDSFSFFNTEKEIQEKVLAFFTDFKHDGRFVNVEVSEDRG
GGGRGRGRSGGGRSSGGRRSGGGDRRRNDDRRSSGRRSDSGSGNRSDRRSSEGSGRRSDS
RDRGDRRSSESSGNRSDRRSSGGDSRSSRRSESSSGSDRPRRSRRRD
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgagcacattcaaagaactcggtctaaatgaagaccttattgcagctattgatgattta
ggatttaaaaatcctagtgatgtacaagcaaaagcaatcccaattttattagaagaagat
accgatttagttgccttagcgcaaacaggaacaggtaaaactgctgcatttggatttcca
atgcttcaaaaaattaatgtagacagtcgcacgactcaaggattgatactctctcctact
cgtgaactatgtttacaaattacaaacgagcttaaactatatggaaaatactgtaaaggt
ttaaatgtagttgctatttatggaggagcaagtatccaagaccaagcaagagctgtaaaa
cgtggcgcacaaattattgtggctactcctggtcgtatgaaagatatgattagtagaaga
atggttgacatttctaaaattgaatattcagttttagatgaagctgatgaaatgttaaac
atgggattctatgaggatatcactgatattctatctcatacaccagatgataaaaataca
tggttattttctgcaacgatgccaaaagaagtgtctaacattgctagaaaattcatggat
agtcctattgaaattacggtaggaaacaaaaatgaaagtacaagccaagtatctcacgaa
tactatttagtaaacgcaagagatcgttaccaagctttaaaacgtttgtctgatgcaaat
ccagatatcttttctgtaattttctgtcgtacaaaacgtgatactcaaaaagttgctgag
aacttaatcgaagatggttatagtgcaggagctttacatggagatttaagtcagaaccaa
cgtgatatggttatgaaatctttcagaaataaacaaatacaaatgcttgtagctacagat
gttgctgctcgtggtattgatgttgatgatattactcacgttataaattatcaattacct
gacgaagctgaaatttacacacaccgttctggacgtacaggacgtgctggtaaaacaggt
atctctatggtgatagtttctaaaagtgaagtccgtaagattaaaagtatcgaacgtatc
atcaagaaagaatttgagaaaaaggaaattcctgatggaatggaaatttgcgaagtacaa
ttaatgtcgcttgcaaacaaaatacacaacactgaagttaatgacgagattgacaaacat
ttaacaagtattaacgaattattcgaagatacagataaagatgaattgattaaaaaattc
ttttctgttgaatttacgcgcttctataattattaccaaaaatctaaaaaactgaatgtt
cctagctcttctagagattctgaaggcgatagtggtggtcgtggttatggcggaagtaaa
aatgaatcacgctactttattaatgtaggacgtaaagacggttacgattggatgaaactg
aaagatttcttaaaagaagttttagagttaggtcgcgatgatgtctttaaagtagatgta
aaagacagtttttcattctttaatactgaaaaagaaatacaagagaaagtattagccttt
tttacagatttcaaacatgacggaagattcgttaatgttgaagttagtgaagacagaggt
ggtggcggaagaggtcgtggtcgttctggtggtggacgctcttctggaggaagacgctct
ggtggtggagaccgaagacgaaacgatgacagacgttcatctggaagacgtagcgattct
ggttctggtaacagaagtgatagacgctcatctgaaggctcaggaaggcgtagtgactca
agagatcgaggcgatagacgttctagtgaaagttcgggaaacagaagtgatagacgaagt
tcaggtggagattcaagatcttcaagacgttcagaaagcagttctggatctgacagacca
agacgttcaagacgtagagattaa
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