Psychroserpens ponticola: MUN68_009775
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Entry
MUN68_009775 CDS
T09473
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
ppon
Psychroserpens ponticola
Pathway
ppon03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ppon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MUN68_009775 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppon03400
]
MUN68_009775 (uvrA)
DNA repair and recombination proteins [BR:
ppon03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MUN68_009775 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MUN68_009775 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_inter
SMC_N
UvrA_DNA-bind
AAA_21
AAA_29
AAA_16
nSTAND1
AAA_15
DnaJ_CXXCXGXG
nSTAND3
AAA_23
RsgA_GTPase
AAA_18
AAA_22
AAA_33
NACHT
AAA_25
Viral_helicase1
cobW
NTPase_1
DUF87
SpoIVA_C
Motif
Other DBs
NCBI-ProteinID:
WCO00360
LinkDB
All DBs
Position
2162961..2165750
Genome browser
AA seq
929 aa
AA seq
DB search
MNTNILDVNPKENIIIKGAKLHNLKNIDVVIPRQKLVVITGLSGSGKSSLAFDTLYAEGQ
RRYVESLSSYARQFLGRLNKPKVDFIKGIAPAIAIEQKVNSTNPRSTVGTSTEIYDYLKL
LFARIGKTYSPVSGDLVKKHRTKDVLDLVKSFDDREKLLLLSPIILEEGRTMIDKLNVLK
QQGYARIQHNEVVLRIDEAVDKKLKKDIFLVVDRIVVKHEDDFYNRLADAIETAFFEGKG
TCIIESLTDKKRTEFNNKFELDGMTFLEPNAHLFSFNNPYGACPKCEGYGDVIGVDEDLV
IPNTGLSIYDNAIFPWRGESMSWYRDQLVNNSHKFDFPIHKPFFELSPEQKQLVWDGNQY
FEGLNSFFTELESKAYKIQNRVMLSRYRGKTKCSVCLGKRLRPETNYVKIGNITITDLVE
MPLDKLVNFFKQLELNNHDTTIANRLLKEISNRLSFLTNVGLDYLTLNRKSNTLSGGESQ
RINLATSLGSSLVGSMYILDEPSIGLHPKDTQKLIKVLKALRDLGNTVIVVEHDEDIMQA
ADEIIDIGPEAGTFGGEVVATGNFKDILASESLTAKYLNGQLKIEVPKKRRTSKYHVDVL
GARENNLQNINVTFPLEMLTVITGVSGSGKSTLVKKILFPALQKKLTDFGDKPGQFTELK
GNFSNIKHIEFVDQNPIGRSSRSNPVTYIKAYDDIRALYASQKLSKIRNYQAKHFSFNVD
GGRCETCKGEGQVTIEMQFMADVHLTCDTCNGKRFKKEVLEVHFNGKSIDDILNLTIDDA
ISFFTEHTQTKIQSKLQPLQDVGLGYVTLGQSSSTLSGGEAQRIKLASFLGKGSKSDNAL
FIFDEPTTGLHFHDIKKLLKSFQALIAKGHSIIVVEHNIDLIKCADYIIDLGPEGGERGG
QLIAQGTPENIAKNKKSITGEFLRDKLYS
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atgaatactaacattttagacgttaatccaaaagaaaacatcatcattaaaggtgccaaa
ttgcacaacttaaaaaatattgatgttgttatacctagacaaaaacttgtagtgattact
ggtttatcaggttctggaaagtctagtttggcatttgacactttatacgcagaaggccaa
agacgttatgtagaaagcctttcaagttatgctagacaatttttaggacgactcaataaa
ccaaaagttgattttataaaaggtatcgctcctgctattgctattgaacaaaaagtaaat
tcaacaaatccaagatctactgttggtacatcaacagaaatctatgattatttaaagtta
ttatttgctagaattggaaaaacctattctccagtttctggagatttagtaaaaaaacat
cgaactaaagatgttctagatttggtaaaatcatttgacgatcgtgaaaaacttctactc
ctttcacctattattttagaggaaggaagaacgatgatagacaaacttaatgttttaaaa
caacaaggatatgcaagaattcaacataatgaagttgtcttaagaattgatgaggctgta
gataaaaaactaaaaaaagacatcttccttgttgtagatcgtattgtagtaaaacacgaa
gatgatttttataatcgattagcagatgctattgaaacggccttctttgaaggaaaaggc
acctgcattatcgaatcacttaccgacaaaaagcgtactgaattcaataacaaatttgaa
ttagatggtatgacttttctagaaccaaatgcacatctattcagctttaataatccttat
ggagcttgtccaaaatgtgagggatatggagatgttattggtgttgatgaagatttagtg
attccaaatacaggtttatcaatatatgataatgctatttttccttggagaggtgaaagc
atgagttggtatagagatcaattagttaataattcacataaatttgatttcccaatacat
aaacctttctttgaattatctcctgaacaaaaacaactcgtttgggatggcaaccaatac
tttgaaggcttaaattccttctttactgaattagaatctaaagcatataagattcaaaat
cgtgtaatgttatcacgttatagagggaaaacaaaatgtagtgtatgtctaggaaaacgg
cttcgtccagaaactaattacgttaaaattggcaatattacaataactgatttagtagaa
atgccattggataaattggtcaatttctttaagcaattagaacttaacaatcatgacaca
acaattgcaaatcgcttgctaaaagaaatatcaaatcgactatcatttctaactaatgtt
ggcttagactatttaactttaaacagaaaatctaacaccttatctggaggtgaaagtcag
cgtataaatttagccacatccttaggaagcagcttggttggatctatgtatatcctagat
gaaccaagtataggcttacatccaaaagacactcaaaaactaattaaagtcttaaaagca
ttgcgcgacttaggcaatacggttattgtggtagagcatgatgaagacattatgcaagca
gcagatgaaataatagatattggtccagaagcaggaacttttggaggtgaagttgtagcc
acagggaattttaaagacatcctagcttcagaatctttaactgcaaaatatctcaacggt
caattaaaaattgaagtgcctaaaaaacgaagaacttctaaatatcatgtagatgtttta
ggagcacgagaaaacaatcttcaaaatattaatgttacgtttccattagaaatgcttacc
gtaattactggagtttcaggaagtgggaaaagtactttggttaaaaagatactatttcca
gctttacaaaagaagttaaccgattttggagacaaacctggacaatttacagagttaaaa
ggaaatttcagcaatataaaacatatagagtttgtagatcaaaatccaatcggaagatca
tcacgttctaaccctgtaacttatataaaagcttatgacgatattagagcattatatgca
agtcagaaattaagcaaaattagaaactaccaagccaagcattttagcttcaatgtagat
ggaggacgatgtgaaacctgcaaaggagaaggtcaagttactattgaaatgcaattcatg
gcagatgtacatcttacatgtgatacatgcaatggaaaacgcttcaaaaaagaagtatta
gaggttcattttaacggaaaatctatagatgatatactgaaccttactatagatgatgct
atttcattttttactgaacatactcaaacaaaaattcaaagcaaattacaacctttacaa
gatgtaggattaggttatgtgactttaggtcagagttcttctactctttctggtggtgaa
gcacaacgaattaaattagcatctttccttggaaaaggttctaaaagcgataatgcttta
ttcatttttgatgagccaacaacgggtttacattttcacgatatcaaaaaattattgaag
tcgtttcaagctttaatagcaaaaggacattcaatcatcgttgtggagcataatatcgat
cttattaaatgtgcagattacatcatcgacttaggacctgaaggaggcgaacgtggcgga
caattaattgctcaaggaactcctgaaaacattgccaaaaataagaaatccattactgga
gaatttttacgtgacaaactctattcttaa
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