Pectobacterium polonicum: LW347_00870
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Entry
LW347_00870 CDS
T08488
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
ppoo
Pectobacterium polonicum
Pathway
ppoo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppoo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LW347_00870 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppoo03400
]
LW347_00870 (priA)
Enzymes [BR:
ppoo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LW347_00870 (priA)
DNA repair and recombination proteins [BR:
ppoo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LW347_00870 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WHD_PriA
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_30
TrwB_AAD_bind
AAA_19
AAA_22
Zn_ribbon_6
ArfA
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
UVO08597
UniProt:
A0AAE9NSW1
LinkDB
All DBs
Position
complement(188720..190918)
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AA seq
732 aa
AA seq
DB search
MSVAQVALPVPLARTFDYLLPAGGIAPQVGARVSVSFGHRKAIGIITALSDTSELPLEQL
KPVHDVLDEQPLFPPSLWRILLWAVEYYHYPIGEVLFHALPILLRQGKPAHRAPLWQWFA
TEQGRATPLSTLKRAAKQQQALAALLQSPLYRHQVSEIGLTETALQALRSKGLCELQAAE
QTLHDWRQSFSLATDRLRLNTEQATAVGAIRSEDNHFAAWLLAGITGSGKTEVYLSVLEN
VLAQGKQALVLVPEIGLTPQTIARFRERFNAPVDVLHSALNDSERLAVGLRARSGEAAIV
IGTRSALFTPFARLGLIVIDEEHDSSYKQQEGWRYHARDLAVFRAREEDIPIVMGTATPA
LETLYNVQLGKYRRLNLTKRAGNAALAKQHVIDLKSLPLTAGLSQPLITRIRHHLTNDNQ
VILFLNRRGFAPVVMCHECGWIAECQRCDHYYTYHQHQKMLRCHHCDSQRPVPQQCPGCG
STNMVPVGLGTEQLEQSLAPLFPDVPITRIDRDTTSRKGALEQQLSQVRQGGARLLIGTQ
MLAKGHHFPDVTLVALLDVDGSLFSADFRAAERFAQLYTQVAGRAGRAGKAGEVALQTHH
PEHPLLQTLLHQGYDAFASQALTERKSVFLPPFTSHILFRADDHDNQQAALFLQQLRNLL
EASPLRDESLGLLGPVPALQPKRAGRFRWQLLLQHPSRALLQKLVRTSLTLIGTLPQARK
VKWVLDVDPTDG
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtcgctcaggtcgctttgcccgtgccactggcacgtacattcgattatttgcta
cccgcaggaggcatcgctccgcaggtcggcgcacgcgtcagcgtctcctttggtcaccgt
aaagcgatcggcattattaccgcgctgagcgacaccagcgaacttccgcttgagcaatta
aaacccgtgcatgacgtgctggacgaacagccgctgttcccgcccagcctgtggcgtatt
ttgctgtgggccgtcgagtactatcactacccgattggcgaagtgctgttccacgcgctg
ccgatactactgcgccaggggaaacccgcacaccgcgcgccgctctggcagtggtttgcc
accgaacagggccgagcgacaccgctcagcacgctcaaacgcgccgcgaaacagcagcag
gcgctggcggctttacttcaatcgccgctttatcgccatcaggtgagcgaaatcgggctg
acggagacagcattgcaggcgctgcgtagcaaagggctatgcgaattacaggccgcagag
caaacgcttcacgactggcgtcaaagctttagtttggcaaccgatcgcctgcgcctgaat
actgaacaggccactgctgtcggcgcgatccgcagcgaagataaccactttgccgcctgg
ctgctcgcaggcatcaccggttcgggcaaaaccgaagtctatctcagcgtgctggaaaac
gtactggcacaaggcaaacaagctctggtattagtgccggaaattggcctgacgccgcaa
acgatcgcccgctttcgcgaacgatttaacgctccggtggatgtgctgcactcggcactc
aacgacagtgagcgccttgccgtcgggctacgcgcccgcagcggtgaagcggctatcgtc
atcggaacgcggtcagcgttatttactccctttgcccgtttggggctgattgtgatcgat
gaagaacacgacagctcctacaaacagcaggaaggctggcgctatcacgcccgtgatttg
gcggtcttccgcgccagagaggaagatattccgatcgtgatgggaacggcaacgcccgca
ctggaaacgctgtataacgtccagctcggcaagtatcgacgcttgaatctgaccaaaaga
gcgggcaacgccgcactagccaaacaacacgttatcgatctgaaaagtttgccgctgacg
gccgggttatcccagccgctgattacccgcatccgccaccatctgacgaacgataatcag
gttattttgttccttaatcggcgcgggttcgcccctgtggtgatgtgccacgagtgcggc
tggattgccgagtgtcagcgctgcgatcactactatacctaccaccagcatcagaagatg
ttgcgctgccaccactgcgacagtcagcgtccggttccacaacagtgccccggctgcggc
tcgaccaatatggtgcccgtcggtctaggaaccgagcagttggagcaaagccttgcgccg
ctctttcccgatgtcccgatcacccgcatcgatcgtgataccaccagccggaaaggcgca
cttgagcagcagctctcgcaggtcaggcagggaggtgcacgccttctcatcggcacacag
atgttggcgaaagggcatcacttccctgacgtgacgctagtcgctttgctggacgttgac
ggttcgctgttctccgccgacttccgcgcggccgaacgttttgcccagctttatactcag
gtagctggacgtgcgggacgtgcaggtaaagcaggcgaagtcgcgctgcaaacgcatcac
ccggaacacccgctattacaaacgctgctgcaccaaggctacgatgcctttgccagtcaa
gcactcaccgaacgaaaaagtgtttttctgccgccgtttaccagccatatcctcttccgc
gccgacgatcacgataaccagcaggccgccttatttctccagcaattacgtaatttactg
gaagccagcccgctgcgggatgaatcactcgggctgctgggcccggtgcccgctttacag
cccaaacgtgcggggcgcttccgctggcagctcctgctacagcacccctccagagcgcta
ttgcagaaactggtcagaacgtcgctgacgctaatcggtacgctgccgcaggcgcgtaaa
gtgaaatgggtgctggatgtcgaccccacagatggttag
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