Pectobacterium polonicum: LW347_01220
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Entry
LW347_01220 CDS
T08488
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
ppoo
Pectobacterium polonicum
Pathway
ppoo00071
Fatty acid degradation
ppoo00280
Valine, leucine and isoleucine degradation
ppoo00310
Lysine degradation
ppoo00362
Benzoate degradation
ppoo00380
Tryptophan metabolism
ppoo00410
beta-Alanine metabolism
ppoo00640
Propanoate metabolism
ppoo00650
Butanoate metabolism
ppoo00907
Pinene, camphor and geraniol degradation
ppoo00930
Caprolactam degradation
ppoo01100
Metabolic pathways
ppoo01110
Biosynthesis of secondary metabolites
ppoo01120
Microbial metabolism in diverse environments
ppoo01200
Carbon metabolism
ppoo01212
Fatty acid metabolism
Module
ppoo_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
ppoo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
LW347_01220 (fadB)
00650 Butanoate metabolism
LW347_01220 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
LW347_01220 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
LW347_01220 (fadB)
00310 Lysine degradation
LW347_01220 (fadB)
00380 Tryptophan metabolism
LW347_01220 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
LW347_01220 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
LW347_01220 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
LW347_01220 (fadB)
00930 Caprolactam degradation
LW347_01220 (fadB)
Enzymes [BR:
ppoo01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
LW347_01220 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
LW347_01220 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
LW347_01220 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
LW347_01220 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
VF530
Motif
Other DBs
NCBI-ProteinID:
UVO08656
UniProt:
A0AAE9NU16
LinkDB
All DBs
Position
complement(261604..263793)
Genome browser
AA seq
729 aa
AA seq
DB search
MLYQGESLYLNWLEDGIVELVFSAPGSVNKLDTRTVASLGKALDVLAEQPNLKGLLLRSD
KPAFIVGADITEFLSLFAAPAEKLHEWLVFANRIFSRLEDLPVPTLSAINSYALGGGCEC
VLATDFRLATTDARIGLPETKLGIMPGFGGTVRLPRLLGADSALEIIAAGKDISAADALK
VGLVQAVVANDKLVPAAIKILKQAIDGSLDWQAYRRPKLDPLKLNKIEAMMSFTTAKAMV
LQTAGKHYPAPMLAVKTIEAAATMTRDDALQLETQHFVQLARSNEARALVGIFLNDQYVK
GKAKKLIGETSVPQQAAVLGAGIMGGGIAYQSAFKGVPIRMKDINEKPLALGMNEAAKLL
NKQMERGKLDGIKMATILASIQPTLDYAGFERTDIVVEAVVENPKIKSSVLAETESHVSE
KTMLASNTSTIPIATLAASLKRPQNFCGMHFFNPVHRMPLVEIIRGPKTSDNTIASVGAY
ASKMGKTPIVVNDCPGFFVNRVLFPYFAAFSLLLRDGADFREIDNVMEKKFGWPMGPAYL
LDVVGIDTAHHAQAVMAEGFPQRMAKDYRDAIDVLFEHQRFGQKNGHGFYRYQADGKGKQ
RKEQDEAVETLLKNISQPKKAFSAEEIIARMMIPMINEVARCLEEGIVASPAEADMALVY
GLGFPPFHGGACRYLDTLGSEHYVEMAQPLAHLGAIYQVPDGLQQKAKSNEGYYPSVAPH
ADVSYGQPA
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgctttatcaaggtgaatccctctaccttaactggcttgaggacggcattgtcgagctg
gtattttctgcccctggctccgtaaacaagctagatacccgcacggttgccagcctgggt
aaggcgctggacgttctggcggaacagccgaatttgaagggcttactgctacgttctgac
aaacctgcatttattgtcggtgccgatatcacggaattcctttctctttttgccgcgcca
gcagaaaagctgcatgaatggcttgtcttcgccaaccgcattttcagccgtcttgaagat
ttacccgttcccacactgtccgcgattaatagctatgcgttgggcggagggtgtgaatgc
gtactggcaaccgactttcgtttagcaacgacggatgcacgcattgggctgcctgagacc
aaactggggattatgccaggctttggtggcacggttaggctgccgcgcctgctgggcgcg
gacagcgcactggagatcatcgccgcaggcaaagatatcagcgcagccgatgccttaaaa
gtgggactcgtgcaggccgttgtcgccaatgacaagctggtgcccgctgccatcaagata
ttgaaacaggcgattgacggctcactggattggcaggcttaccgacgtccgaaacttgac
ccgctgaagctcaataagattgaagccatgatgagctttaccaccgccaaagcgatggtg
ctgcaaaccgctggcaagcactatcccgcaccgatgctagcggtaaaaaccatcgaagcc
gccgcgactatgacgcgcgatgacgcattgcagctcgaaacgcagcatttcgttcaactg
gcgcgttcaaatgaagctcgcgcactcgtcggaattttccttaacgatcaatatgttaaa
ggcaaagcgaagaagctgattggcgagacatccgtgccacagcaggccgccgtgctaggt
gctggcattatgggtggcggaattgcctatcaatccgcgttcaaaggcgtgccgattcgg
atgaaagatatcaatgagaagccgctcgcgctggggatgaatgaggcagccaagctactg
aataagcagatggagcgcggcaagctggacggaataaaaatggcaacgattctggcgagc
attcagccaacgctggattatgctgggttcgagcgcaccgacatcgtcgttgaagccgtg
gttgagaacccgaaaatcaaatccagcgtgttggcagaaaccgaatcgcacgtgagcgag
aagacgatgctggcttcgaatacctcaaccatcccgattgctacgctggcagcatcgtta
aaacgaccgcaaaatttctgcggtatgcacttctttaacccagtccaccgcatgccacta
gtcgaaattattcgcggccccaaaaccagcgataacaccatcgccagcgtgggggcttac
gccagcaagatgggaaaaacaccgatagtcgtgaacgactgccccggattcttcgtgaat
cgggtgctgttcccctactttgctgcgttcagcttattgctcagagacggtgccgatttc
cgtgagatcgataacgtcatggagaaaaaattcggctggccgatgggcccggcctatctg
ctggacgttgtcggtattgataccgcccaccatgcgcaagcagtgatggctgagggcttc
ccacagcgaatggcgaaagattatcgcgatgcgattgatgtgttgtttgaacatcagcgt
ttcggacagaagaatggtcacggcttctaccgttatcaagccgatggcaaggggaaacag
cgtaaagaacaggatgaggctgtcgaaacactgcttaagaacatcagtcagccgaaaaaa
gcgttcagtgcagaagagattatcgctcgcatgatgatcccgatgattaatgaagtcgcg
cgctgtctggaagaaggtatcgtcgccagcccggccgaagcggacatggcgctggtatat
gggttaggtttccctcccttccacggcggagcctgccgctatctggatacattgggcagt
gaacactacgtcgagatggcgcaaccgttggcacacctcggtgcaatctatcaggtgcct
gacggcttgcagcaaaaagccaaaagtaatgaaggctattatccatcggtcgcgccacac
gcggacgtttcttacggtcaaccggcatga
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