Pectobacterium polonicum: LW347_03345
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Entry
LW347_03345 CDS
T08488
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ppoo
Pectobacterium polonicum
Pathway
ppoo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppoo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LW347_03345 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppoo03019
]
LW347_03345 (pnp)
03016 Transfer RNA biogenesis [BR:
ppoo03016
]
LW347_03345 (pnp)
Enzymes [BR:
ppoo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
LW347_03345 (pnp)
Messenger RNA biogenesis [BR:
ppoo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
LW347_03345 (pnp)
Transfer RNA biogenesis [BR:
ppoo03016
]
Prokaryotic type
tRNA degradation factors
LW347_03345 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
S1_RRP5
KH_2
S1_2
OB_RRP5_4th
KH-I_KHDC4-BBP
aRib
DUF4172
KH_SLS1_2
Spt6_S1
Motif
Other DBs
NCBI-ProteinID:
UVO09032
UniProt:
A0AAE9NTN0
LinkDB
All DBs
Position
744644..746764
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AA seq
706 aa
AA seq
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MLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGAKNAKPGQSFFPLT
VNYQERTYAAGRFPGGFFRREGRPSEGETLISRLIDRPIRPLFPEGFLNEVQVIATVVSV
NPQVNPDIVAMIGASAALSLSGIPFSGPIGAARVGYLNDQYVLNPTTDELKESRLDLVVA
GTEGAVLMVESEADLLSEDQMLGAVVFGHDQQQVVIENINALVAEAGKPKWEWHAPEVNV
SLEQRVQALSEARLGDAYRITEKQERYAQVDVIKADVVAALQAEDETLNAGEIQEILGNV
EKNVVRSRVLAGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTER
DAQTIDELTGERTDRFLLHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPKASE
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKSAVAGIAMGLVKEGDNFVVLSD
ILGDEDHLGDMDFKVAGSREGITALQMDIKIEGITREIMQVALNQAKGARLHILGVMEQA
ISTPRGDISEFAPRIHTIKISTDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAST
DGEKAKHAIRRIEEITAEIEVGRVYQGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLQMGQEVPVKVLEVDRQGRVRLSIKEANAQTQEAAAPSSEE
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
ttgctgaatccgatcgttcgtaagtttcaatatggtcagcataccgtcacgttagagaca
ggtatgatggcacgccaggctaccgctgctgtaatggtaagcatggatgacacagcggta
tttgttaccgttgtcggcgctaaaaacgctaaacccggccaaagtttcttcccgttgacg
gttaattatcaagagcgtacctacgctgctggacgtttccccggtggtttcttccgccgt
gaaggtcgtccaagtgaaggcgaaacgctaatttctcgtctgattgaccgtccgattcgt
cctctgttcccagaaggtttcctgaatgaagttcaggtgattgcaactgtcgtttctgtt
aatccacaggttaaccctgacatcgttgccatgattggcgcctctgcggcactgagtctg
tccggtatcccgttcagcggtcctatcggtgcggcgcgcgtcggttacctgaacgatcag
tatgtcctgaacccaacaacggacgagctgaaagaaagccgtctggatctggttgttgca
ggtacagaaggcgcggttctgatggtggaatccgaagctgacctgctgagtgaagaccaa
atgctgggtgcagtcgtgtttggtcacgatcaacaacaggtggttatcgaaaacatcaac
gctctggttgccgaagcaggcaaaccgaagtgggaatggcatgcgccagaagttaatgtt
tctttagagcagcgtgtacaggctttgtctgaagctcgtttgggtgacgcttatcgcatc
accgaaaaacaagagcgctatgcacaggttgacgtcatcaaagctgatgttgttgctgct
ctgcaagccgaagatgagacgctgaatgctggcgagatccaggaaattctgggcaacgtc
gagaaaaacgttgtgcgtagccgcgtactggctggcgaaccgcgcatcgatggccgtgaa
aaagacatgattcgtggtctggacgtgcgtacgggtgtactgccgcgtacccacggttct
gcgctgttcacccgtggtgaaacgcaggcgttggtcactgcaacgcttggtactgagcgt
gatgcccagaccattgatgaactgaccggtgaacgtaccgatcgcttcctgctgcactac
aacttccctccgtactctgttggtgaaaccggtatggttggttcgcctaagcgtcgtgaa
attggtcacggtcgtctggctaagcgcggcgtgttggctgttatgccgaaggcgagcgaa
ttcccgtacactgtgcgtgtggtatctgaaatcacagaatctaacggttcttcttcgatg
gcgtctgtctgcggtgcttctctggcactgatggatgcaggtgtgccgatcaaatcagcc
gttgcgggtatcgcgatgggtctggtgaaagaaggcgacaacttcgttgttctgtccgac
attctgggtgatgaagaccacctgggcgatatggacttcaaagttgctggtagccgcgaa
ggtatcaccgcgctgcaaatggatatcaagatcgaagggattacccgtgagatcatgcag
gttgctttgaatcaagccaaaggtgcgcgtttgcacattctgggtgtgatggagcaggca
atcagcacgccgcgtggcgatatctccgaatttgcaccgcgtattcacaccatcaaaatc
agtaccgataagatcaaagatgtgatcggtaaaggtggttcagtgatccgtgctctgacc
gaagagacgggtacgaccattgaaatcgaagacgatggtacagtgaagatcgcttcaacc
gacggcgaaaaagcgaaacacgcgattcgtcgtattgaagagatcactgccgaaatcgaa
gtcggccgcgtgtatcagggtaaagttacccgcatcgttgattttggtgctttcgtcgct
attggcggcggtaaagaaggtctggtacatatttctcagatcgccgacaagcgtgtagag
aaagtgactgactacctgcaaatgggtcaggaagtgccagtcaaggttctggaagttgat
cgtcagggccgtgtgcgcttaagcatcaaagaagctaatgcgcaaactcaggaagcggca
gccccgtcttctgaggaataa
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