Pectobacterium polonicum: LW347_03820
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Entry
LW347_03820 CDS
T08488
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
ppoo
Pectobacterium polonicum
Pathway
ppoo02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ppoo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LW347_03820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppoo03021
]
LW347_03820
Transcription machinery [BR:
ppoo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LW347_03820
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
PhyR_sigma-like
Sigma70_ECF
HTH_23
GerE
HTH_28
HTH_11
Motif
Other DBs
NCBI-ProteinID:
UVO09120
LinkDB
All DBs
Position
860433..860957
Genome browser
AA seq
174 aa
AA seq
DB search
MKSPAAVCPNQPETLSFQQIYHDHHAWLQAWLRRRLGCSQQAADLAQDTFLRLIYQHQTD
RIREPRAWLTTVAHGLMVNHWRRKDIEHAYLQVLAEQEFTFSPSLEQQAMVVDALLDIEQ
MLSTLPGKVRQAFLLVHLDGLTYRQVAEQLAVSERMVKKYMAQAMLNCLLCQDL
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
gtgaagagtcccgctgctgtctgccccaatcagcctgaaaccttaagttttcagcaaatc
tatcatgaccaccatgcctggttgcaggcatggctgcgtcggcgtttggggtgttcacag
caggcggcggatttggctcaggatacgtttctacggttgatctaccagcatcagaccgac
cgtatccgtgaaccgcgcgcctggctgacgaccgtggctcatgggctgatggtgaaccac
tggcgacgcaaagatatcgagcatgcctaccttcaggtactggcagagcaggaatttact
ttttcgccctcgttggaacagcaggctatggtagttgatgcgttgctggatatagaacag
atgttatcgacgttgccggggaaagtgcgtcaggcattcttgctggtgcatcttgacggc
ttgacctatcgacaggtggctgaacaattagccgtttccgagcgaatggtgaaaaaatat
atggcacaggcaatgctgaattgtctattgtgtcaggacttatga
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