Pectobacterium polonicum: LW347_05050
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Entry
LW347_05050 CDS
T08488
Name
(GenBank) ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
ppoo
Pectobacterium polonicum
Pathway
ppoo00330
Arginine and proline metabolism
ppoo00480
Glutathione metabolism
ppoo01100
Metabolic pathways
ppoo01110
Biosynthesis of secondary metabolites
ppoo04148
Efferocytosis
Module
ppoo_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
ppoo00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
LW347_05050
09106 Metabolism of other amino acids
00480 Glutathione metabolism
LW347_05050
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
LW347_05050
Enzymes [BR:
ppoo01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
LW347_05050
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Paralog
Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
UVO09343
UniProt:
A0AAE9NUK3
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Position
1102569..1104722
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AA seq
717 aa
AA seq
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MKQLKIAANAAVATRLITTREIVALGQTDFTDVAAVVVSIEEARSGILSILQHTGFSIPA
FVEEPDEDKELDVLPAGSEWLVLDDDGEHANVLERAAKAYQDTLLPPFFDTLTKYVNMKN
TTFACPGHQGGQFFRKHPAGRQFFEFYGENVFRSDICNADVKLGDLLIHEGAAKKAQKHA
ARVFNADKTYFVLNGTSSANKVVTNALLARGDLVLFDRNNHKSNHHGALIQAGATPVYLE
TVRNPFGFIGGVDAHCFDEAYLRKLIAEVAPERANEARPFRLAVIQLGTYDGTIYNARQV
VDSIGHLCDYILFDSAWVGYEQFIPMMEQCSPLLLDLNENDPGIFVTQSVHKQQAGFSQT
SQIHKKDTHIKGQRRFCNHKQLNNAFMLHASTSPFYPLFAALDVNAKMHEGASGRRMWMD
CVKLGIEARKQLLTRCSLIKPFVPVTVGGALWQDHDTEAIAQDVRFFNFEPGEKWHAFEG
YAEDQYFIDPCKLLLTTPGIDAISGDYTEFGIPATILANYLREHGIIPEKCDMNSILFLL
TPAEDGAKMQELVNALVHFETLIARDAPLSEVLPSLYQKYKERYRGYRLRRLCQEMHDFY
AQHNVKDLQKAMFRKTEFPSVVMLPQDANREFVRGNIELIPIDEAEGRIAAEGALPYPPG
VLCVVPGETWGGAVQRYFLALEAGINLLPGFSPELQGVYSVAEEDGSKRLYGYVVEQ
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagttaaaaattgcggcgaatgcagcggttgccacccgtttaatcaccacgcgc
gagattgtcgcgttgggtcagactgacttcactgatgtggcggcggtcgtggtttctatt
gaggaagcccgtagcggcattctgtcgatattgcagcacaccggttttagcattccggcg
tttgtcgaagagcctgacgaggataaagaattagatgttcttcctgcgggcagcgaatgg
ctggttcttgatgacgatggcgagcacgccaacgtgctggaacgcgcggcgaaagcctat
caggatacgttgctgccaccgtttttcgatacgctgaccaagtacgtcaacatgaaaaac
acgacgtttgcctgcccagggcatcagggcggtcagttcttccgcaagcacccggcgggg
cgtcagttttttgaattttacggcgagaacgtgtttcgttcggatatctgtaacgcggac
gtcaaactgggcgatttgctgatccacgaaggggcagcgaagaaggcgcagaagcacgct
gcgcgcgtgtttaacgccgataaaacctatttcgtgttgaatggcacctcctcggcgaac
aaagtggtgacaaacgcgctgctggcgcgtggcgatctggtgctgtttgaccgtaacaac
cataaatccaaccatcacggtgcgctgattcaggcgggcgcgacgccggtctatctggaa
accgtgcgcaacccgtttggctttatcggcggcgtagatgcgcactgttttgatgaggcc
tacctgcgcaagctgattgcggaagtcgcgccggaacgcgccaacgaggcgcgcccgttc
cgtctggccgtcatccagctcggcacctatgacggcaccatttataatgcgcgtcaggtg
gtcgatagcatcgggcacctgtgtgactatattctgtttgactccgcctgggtcggctac
gagcagtttatcccgatgatggagcagtgctcgccgctgttactggatctgaatgaaaac
gatccgggcatttttgtgactcagtcggtgcataagcagcaggctggcttctcccagacc
tcgcagatccacaaaaaagatacgcacatcaaaggccagcgtcgtttttgcaaccacaaa
cagctgaataatgcttttatgctgcatgcctcgaccagcccgttttacccgctgttcgcc
gcgctagacgtcaatgccaaaatgcacgaaggggcaagtgggcgtcggatgtggatggac
tgcgtgaagctgggcattgaagcccgtaagcaactgttaacgcgctgttcgctcatcaaa
ccgttcgtgcctgtgacggtaggcggggcgctctggcaggatcacgatacggaggcgatc
gcgcaggacgtgcgtttcttcaacttcgagccgggcgagaaatggcacgcgtttgaaggc
tatgcggaggatcaatactttatcgatccttgcaagttactgctgacgacgccgggtatt
gatgcgattagtggcgattataccgaatttggtattccggcgacgatcttggctaactac
ctgcgcgagcacggcatcatccctgaaaaatgcgacatgaactcgattctgttcctgtta
acgccagcggaagacggcgcaaaaatgcaggagctggtgaatgcgctggtgcatttcgaa
acgctgatcgcccgcgatgcgccgctgagcgaagtgctgcccagcctgtatcagaaatac
aaagagcgctaccgtggttaccggctgcgtcggttatgtcaggaaatgcatgatttttac
gctcagcacaacgtgaaagatctgcaaaaagcgatgttccgcaaaaccgagtttccgtcc
gtggtgatgctgccacaagatgctaatagagaatttgtgcgcgggaatatcgaactgatt
cctatcgacgaagcggaagggcgtatcgcggcggaaggcgcattgccgtatccacctggc
gtgctgtgtgtggtgccgggtgaaacctggggcggggcggtacagcgctattttctggcg
ctggaagcgggaattaacctgctgcccggcttctccccggaattgcagggtgtctatagc
gtcgcggaagaagatggcagcaagcgtctgtacggttacgtagtagaacaataa
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