Pectobacterium polonicum: LW347_05195
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Entry
LW347_05195 CDS
T08488
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
ppoo
Pectobacterium polonicum
Pathway
ppoo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppoo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LW347_05195 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppoo03400
]
LW347_05195 (recB)
Enzymes [BR:
ppoo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LW347_05195 (recB)
DNA repair and recombination proteins [BR:
ppoo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LW347_05195 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
AAA_22
AAA_11
ResIII
Motif
Other DBs
NCBI-ProteinID:
UVO09369
UniProt:
A0AAE9T3H6
LinkDB
All DBs
Position
1138183..1141764
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AA seq
1193 aa
AA seq
DB search
MKNVAPQSLDVMTLPLLGERLIEASAGTGKTYTLAALYLRLLLGLGKQAAYPRPLLVEEI
LVVTFTEAATEELRERIRARIHALRIACLRKSAQGEEAGKHKDTSLVQLLAEIADHREAA
DVLLAAERQMDEAAIYTIHGFCQRMLSTNAFESGVLFEQVLIEDEQPLRRQACADFWRRY
CYPLPVEVARIVGLEWKGPENLLADMAPYLHGEAPAFRLPPEEGETLLSRHEKIVAAIDA
YKQDWLASAADLEALIVASGVDKRSYSSKHLPNWLQKVTLWAEQLTLDYQLPKDLVRFAQ
QTLIEKTKKGDPPVHPVFEATEQLLAAPLSLRDLVIVRALSAIRDSVREEKRQRAELGFD
DLLSRLDDALQQPAGERLADAIRERYPVAMIDEFQDTDPQQYRIFRTLYVGQSQCGLLLI
GDPKQAIYAFRGADIFTYMHARGEVAAHYTLGTNWRSSHPMVRGVNRLFERLEHPFIFQN
IPFLPVNPAESKRGLVFEVAGQPQPALQFWLTGAEPIGVGDYQQQMARQCAAQIRDWLAA
SQRNEAWLITDDSRRLVKASDMSVLVRSRREASLIRDALSRLSIPSVYLSNRDSVFSTPE
ASDILWLLQAVLAPEQERTLRSAMATALMGLDAAQVDALGQSESAWDALVDEFAGYRALW
RQRGVLPMLRALMSQHQLAENLLASTEGERRITDILHIGELLQDASATLDSEHALVRWLS
QQVVQPNPQAESQQLRLESDRHLVQIVTIHKSKGLEYPLVWLPFISNFRVQDQGVYHDRE
SYQAVLDLQNSEEIQTLAEEERLAEDLRLLYVALTRSIYHCSVGVAPVQRSRKKDGSSDM
HHSALGYLLQRGKEAEAATLVSELEGMVGDGVELTRLQATKEQRWQPDRPELAELRARHI
ERQLRDSWRVTSYSGLQQHGSTNTQDLVPRLDIEAIGERQEVGETQLTPHTFPRGASPGT
FLHSLFETLDFTQLVDDDWLAEQLQLQGFEAHWHPVLKAWMDTLLTTPLDEHGTTLSALE
NQDKQAELQFYIPIEAPMQATQFDRLAKHYDPLSARCPALSFQQVKGMLKGFIDLVFRWE
GRYYLLDYKSNWLGPDASAYTQAAMMQSMAEHRYDLQYQLYTLALHRYLRHRIADYDYER
HFGGVFYLFLRGVEESHPGNGIFACRPSAEFVFGLDALFKGKTPDDADTGISS
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatgtcgcgcctcaatcattagacgtcatgacgttgccgctcctgggggagcgg
ttgattgaggcgtcggctggaacgggtaaaacctatacgctggctgcgctttacctgcgc
ctgctgctggggctgggtaagcaagccgcgtatccacgcccgttactggtcgaggagatt
ctggttgtgacctttacggaggccgcgaccgaagagctgcgtgaacgcattcgtgccaga
atccacgcgctgcgcattgcctgcctgcgtaaaagcgcccagggtgaagaggcgggaaaa
cataaggatacgtcgctagtgcaactgctggcggagattgcggatcatcgagaggccgcc
gatgtgttgttggcggctgaacgacaaatggacgaagcggcaatctacacgatccacggc
ttctgccagcgtatgctcagtaccaatgcgtttgaatccggcgtgttgtttgaacaggtg
ctgatagaagatgaacagccgctgcgccgtcaggcctgcgccgatttctggcgtcgttat
tgttatcctctaccggtagaggtcgcacgtatcgtcggtctggaatggaaagggccggag
aatttgctggccgatatggctccttatctgcacggcgaagcccccgcgtttcgcttaccg
ccagaagagggagaaacgctgctgagtcgacatgagaaaattgtggcggcgattgatgct
tataaacaggactggctggcgtcagcagcggatctggaagcgctaatcgtggcatctggt
gtggataaacgcagctacagcagtaagcatctccccaattggctacagaaagtcacgctg
tgggcggagcagctaacgctggattatcaactgccgaaagatctggtgagatttgcccag
caaacgttaatcgagaaaacgaagaaaggcgatccaccggttcatccggtgtttgaagcg
acggaacaactgcttgcagcaccgctgtcgctgcgtgatttggtcattgtacgtgcgctg
tcggcaattcgggattctgtgcgtgaggaaaaacggcagcgtgcggaactggggtttgac
gatctgctgagccgtttggatgatgcattacaacagccggcaggagaaagactggctgac
gccattcgtgaacgttatccggtggcgatgatcgatgagtttcaggataccgatcctcaa
caataccgtattttccgcacgctttatgtcgggcaatcgcagtgcgggctattgttgatc
ggtgaccctaagcaggctatttatgcgtttcgcggtgcggatatttttacctatatgcac
gcgcgtggcgaagtggctgcgcattatacgttgggcacgaactggcgctcgtcacacccg
atggtacgtggcgtgaatcgcctgtttgaacgtctcgaacacccttttatttttcaaaat
atccctttcctgccggttaaccctgctgaatctaagcgcggtttggtgtttgaagttgcc
gggcagcctcagcctgcgctgcaattctggctaacgggcgcggaaccgattggcgtggga
gattatcaacaacagatggcgcgccagtgtgcggcgcagattcgtgactggctggccgct
agccagcgtaatgaagcctggttgataaccgatgattcccggcgtttggtcaaagcatct
gacatgagtgtgctggtgcgtagccgacgtgaagcgtcgttgatccgcgatgcgctgagt
cgtttgtccattccctcggtctacctgtccaatcgcgatagcgtgtttagcacgccggaa
gccagcgatatcttgtggttgttgcaggcggtgttggcaccggagcaggagcgcacgtta
cgcagcgccatggcgacggccctgatggggctggatgccgcacaggtcgatgcgctgggg
caaagtgaatcagcgtgggatgcgctggtggatgagtttgctggctaccgcgctctgtgg
cgtcagcgtggcgtgctgccgatgctgcgagcgttgatgagccaacatcaactggctgag
aatttgctggcaagtacagagggcgaacgccgcattaccgatattctgcacatcggtgaa
ttattgcaggatgcctcggcaacgcttgatagcgaacatgcgctggtacgctggctatcg
caacaggttgtccagcctaatccgcaggcagagagtcagcagctacgtctggaaagcgat
cgccacttggtacagatcgtgacgatccacaaatcgaaagggctggaatacccgctggtg
tggctgcctttcatcagtaatttccgcgtgcaggatcagggcgtttatcacgatcgcgag
agctatcaggctgtgttggatctgcaaaatagtgaagaaatccagacgctggcggaagaa
gagcggctggcggaagatttacgtctgttgtatgtcgcgctgacccgttctatctaccac
tgtagcgtgggcgtcgcgcccgttcagcggtcgcgtaagaaagatggcagcagcgatatg
caccacagcgcgctgggctatttgcttcagcggggtaaagaagcggaggcagccacgtta
gtcagcgagctggaaggcatggtgggggacggcgtcgaattaacacggctacaggcaacg
aaagaacagcgttggcagccggatagaccagaattggcagagttgcgggctcgacatatt
gaacgccaactgcgtgacagctggcgagtgaccagttattcagggcttcagcaacatggc
agcacaaacacgcaggatctggtgccacgtctggatattgaagcgataggtgaacgtcag
gaagtgggggaaacccagttgacgccgcatacgttcccgcgcggcgcgagtccggggacg
tttttgcatagcctgtttgaaacgttggactttacccaactggttgatgatgactggctg
gccgagcagttgcagctacaggggtttgaagcgcactggcatccggtgttgaaggcgtgg
atggatacgcttttgactacgccgcttgacgagcacgggacgacactatcggcgctggag
aatcaggataagcaggctgaattacagttctacataccgattgaggctccgatgcaggcg
acgcagttcgatcggttggcaaagcactacgacccgctatctgcacggtgtcccgcgctg
tcttttcagcaggttaaaggcatgctgaaagggtttatcgatctggtgttccgctgggaa
gggcgttactacctgttggactataaatccaactggctcggccccgatgccagtgcctat
acccaagcagcgatgatgcagtcgatggcagagcaccgttatgacctgcaataccagctt
tacacgctggctttgcatcgctatctccgtcaccgcattgcggattacgactatgagcgc
cattttggcggcgtattttatctgtttttacgcggcgttgaggaatctcaccctggtaat
ggcatttttgcttgtcgtccctctgctgaatttgttttcgggcttgatgcgctcttcaag
ggaaagacgcctgatgatgctgacacaggaatttcgtcatga
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integrated database retrieval system
