Pectobacterium polonicum: LW347_05450
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Entry
LW347_05450 CDS
T08488
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ppoo
Pectobacterium polonicum
Pathway
ppoo03030
DNA replication
ppoo03430
Mismatch repair
ppoo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppoo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LW347_05450 (dnaE)
03430 Mismatch repair
LW347_05450 (dnaE)
03440 Homologous recombination
LW347_05450 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppoo03032
]
LW347_05450 (dnaE)
03400 DNA repair and recombination proteins [BR:
ppoo03400
]
LW347_05450 (dnaE)
Enzymes [BR:
ppoo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LW347_05450 (dnaE)
DNA replication proteins [BR:
ppoo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LW347_05450 (dnaE)
DNA repair and recombination proteins [BR:
ppoo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LW347_05450 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
DNA_pol_IIIA_C
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
UVO09413
UniProt:
A0AAE9SYI2
LinkDB
All DBs
Position
1196080..1199562
Genome browser
AA seq
1160 aa
AA seq
DB search
MAEPRFVHLRVHSDYSMIDGLAKVGPLVKKAAALGMPALAITDFTNLCGLVKFYGGAHGA
GVKPIIGADFYVESDELGDELAHLTVLAMNNEGYQNLTLLISHAYQRGYGAAGPTIDRDW
LIEHQEGLILLSGGRRGDVGRFLLRGNQTQAEHCLAFYQEHFPQRYYLELIRTSRPDEES
YLHAAVELATKHGIPVVATNEVCFISTDDFDAHEIRVAIHDGYTLDDPKRPRNYSPQQYM
RSEEEMCELFADIPEALANSVEIAKRCNVTIRLGEYFLPQFPTGDMTTEDFLVECSKKGL
EDRLEFLFPDPEVRAERRPEYDERLDIELGVINQMGFPGYFLIVMEFIQWSKDNDVPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDKVIDHVAE
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLEKAFAAEPQ
LPEIYEADEEVKALIDMARKLEGVTRNAGKHAGGVVISPTKITDFAPLYCDAEGNHPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIIDWALGMINARRAKQGLEPIDIAAIPLEDKKSFDML
QRSETTAVFQLESRGMKDLIKRLKPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREA
ISYPDIEWQHESLKPVLEPTYGIILYQEQVMQIAQVLAGYTLGGADMLRRAMGKKNPVEM
AKQRGGFEDGAKSRGVNGELAVKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTDKVVGLVDECWRMGLKILPPDINSGLYHFHVNDDGEIVYGIGAIKG
VGEGPIEAIIEARNQGGYFRELFDLCARTDIKKLNRRVLEKLIMSGAFDRLGPHRAALMN
SLPDALKAADQHAKAEAIGQVDMFGVLADAPEQVEQSYSTVPPWPEQVVLDGERETLGLY
LTGHPITQYIKEIERYAGGVRLKDMHPTDRGKMTTAVGLVLAARVMVTKRGNRIGVCTLD
DRSGRLEIMLFTDALEKYQHLLEKDRILIASGQVSFDDFSGGLKMTVRELMDISEAREKY
ARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQREDARARLRFGAAWRVTPAD
ALLNELRTLVGNEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaccacgttttgttcacctgcgtgttcacagtgactattccatgatcgatggg
ctggccaaagtcggtccgctggtaaaaaaagcggcggcgctcggtatgcccgcgctggcg
attaccgattttaccaacctgtgtggactggttaaattctatggcggcgcacatggcgct
ggggtcaaacctatcatcggcgcggacttctatgtcgaaagcgatgaattaggggatgaa
ctggcgcatctcactgtgctagccatgaacaatgaaggctaccagaatctcacgctgctg
atttcccatgcttatcaacgaggctatggtgctgccgggccgacaattgaccgtgattgg
ctgattgagcatcaggaaggtctgattcttttgtcgggtggtcgccgtggtgatgtcggt
cgatttttgctgcgcggtaaccagacgcaggccgaacattgtctggccttctatcaggaa
cacttcccccagcgttactatctggaactgatccgcacgtcccgccccgatgaagaaagc
tatttgcacgcggccgtcgagctggcgacgaagcacgggatacccgtggtggcgaccaat
gaagtgtgttttatcagcaccgatgattttgacgctcacgaaatccgcgtagcgattcac
gacggctacacgcttgatgaccccaaacgcccgcgtaattacagcccgcagcagtacatg
cgttccgaagaggaaatgtgcgagctgtttgcggatatccctgaagcgctggcgaacagc
gttgaaattgccaagcgctgtaacgtgacgattcgtctgggcgaatatttcctgccgcag
ttcccgacgggcgacatgaccacggaagattttctggttgagtgctcgaaaaaagggctg
gaggatcgcctcgaattcctgttccccgacccggaagtgcgcgctgagcgtcggcctgaa
tatgatgagcgtctggatattgaactgggcgttatcaaccagatggggttccccggttac
ttcctgatcgtcatggaatttatccaatggtcgaaggataacgatgtgcctgttgggccg
ggacgtggttccggtgcgggttcgttagtggcctacgcgctgaaaatcaccgatctggac
ccgctggaattcgacctgctgttcgaacgtttcctcaaccctgaacgtgtctccatgcct
gacttcgacgtcgatttctgcatggaaaaacgcgacaaggtcatcgatcacgtcgcggaa
atgtacgggcgtgatgcggtatcgcagattatcaccttcggtacgatggcggcgaaagcg
gtgattcgtgacgtagggcgcgtgcttgggcacccttatggctttgtcgatcgtatttca
aagctggtgccgcccgatccgggcatgacgctggaaaaggcgtttgccgccgaaccgcaa
ttgccggaaatttatgaagccgatgaggaagttaaggccctcatcgatatggcgcgcaag
ctcgaaggggtcacgcgtaacgccggtaaacatgcgggtggggtggtgatatcccccacc
aagattaccgatttcgcgccgctgtattgcgatgcggaagggaaccatccggttacccag
ttcgataagaacgacgtggaatatgccgggctggtgaagttcgacttcctcggcctgcgt
acgctgaccatcatcgactgggcgctggggatgattaacgcccgtcgcgcgaagcaaggg
ctggagccgattgatattgccgcgattccgctcgaagataagaaaagcttcgatatgctg
caacgctcggaaaccaccgcggtattccagcttgaatcgcgcggcatgaaagacctgatc
aaacgtcttaagcccgactgctttgaagatatgatcgcactggtggcgctgttccgcccc
ggcccgctgcaatccggcatggtagataactttattgaccgtaagcatggtcgtgaagcg
atctcgtatcctgatatcgaatggcagcacgagtcactcaagcccgtgctggagccgacc
tatggcattatcctgtatcaggaacaggtcatgcagatcgcacaggttctggcgggctat
acgctgggcggcgcggacatgctgcgtcgtgcgatggggaaaaagaacccggtcgaaatg
gcgaagcagcgtggtggcttcgaagacggtgctaaatcgcgcggcgtgaacggcgaactg
gcggttaagattttcgacctggtggaaaaattcgccggttacggctttaataaatctcac
tccgcggcttatgcgctggtgtcttaccaaacgctgtggctgaaagcgcattatccggca
gaattcatggcggcggtgatgacggccgatatggacaacacggataaagtagtcggtctg
gttgatgaatgctggcggatggggttaaaaatcctgcccccagacatcaacagcggcctg
tatcacttccacgttaacgacgatggcgagattgtttacggcatcggcgcgattaaaggt
gtgggggaaggtccgattgaggcgattatcgaagcgcgtaatcagggcggctattttagg
gaactgtttgacctctgcgcgcgtaccgacattaaaaagctgaaccgccgcgtgctggaa
aagctgattatgtctggggcgttcgaccgtctggggccgcatcgcgccgcgctgatgaat
tcattgcctgatgcgctgaaggccgccgatcagcatgcgaaagcggaagccattggtcag
gtggatatgttcggcgtgctggccgatgcgccagagcaggttgagcaatcttacagcacc
gtgccaccgtggccggagcaggtggtgctggatggtgaacgggaaacgctggggctgtat
ctgactggccacccgatcacgcaatatattaaggaaattgaacgctatgccggtggcgtg
cgtttgaaagatatgcacccgacggatcggggtaaaatgaccactgccgttgggctggtg
ttggcggctcgcgtcatggtcaccaaacggggtaaccgtattggtgtctgtacattggac
gatcgttccggtcggctcgagattatgctgtttactgatgcattggaaaaatatcagcat
ttacttgagaaagaccgtatccttatcgccagtggacaggtcagctttgatgacttcagc
ggcgggcttaaaatgaccgtccgagagttaatggatatcagtgaagcgcgggaaaaatac
gcgcgcgggcttgctatctcgctgactgacaggcaaattgatgaccagctattaaaccgt
ctccgccaatcgttggaaccccatcgatcggggacgatcccagtgcatctctattaccag
cgtgaagatgcgcgcgcccgactacgtttcggcgcagcatggcgtgtaacgcctgccgat
gcgctactgaacgagctgcgcacattagtgggtaatgagcaggtggaactggaatttgac
taa
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