Pectobacterium polonicum: LW347_05600
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Entry
LW347_05600 CDS
T08488
Name
(GenBank) type I secretion system permease/ATPase
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
ppoo
Pectobacterium polonicum
Pathway
ppoo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ppoo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LW347_05600
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppoo02000
]
LW347_05600
02044 Secretion system [BR:
ppoo02044
]
LW347_05600
Transporters [BR:
ppoo02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
LW347_05600
Secretion system [BR:
ppoo02044
]
Type I secretion system
Adhesin protein transporter
LW347_05600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_21
AAA_22
RsgA_GTPase
NACHT
SMC_N
AAA_29
TsaE
AAA_18
DUF87
MMR_HSR1
Peptidase_C39
CLP1_P
cobW
AAA_10
Motif
Other DBs
NCBI-ProteinID:
UVO09441
UniProt:
A0AAE9T122
LinkDB
All DBs
Position
complement(1230411..1232549)
Genome browser
AA seq
712 aa
AA seq
DB search
MTQVTNTEVWIAAMARAAAHYGQVVDIPSVRQQMRWYEQLPIARQLEQISHLMGLTISLR
HTEKLRWRNQILPVLAETDDGGVIVIESLNDEGLATYWLNDGGDLQREAELAELIKHSQG
IIVLVGIAERGRDTRIDDFVKPYRKHWFWQHFRGAKRQIGEISLASIVGNVLALAGILFS
MQVYDRVIPAQSIPTLWVLFFGVLLAAALEYAIRLSRTVVSDLMGKSIDLHVSGMLFARA
RAIKNEARPKSTGSFISQLREIDQVRELLTSTTVGAAADMPFVFLFLGIMAMIGGPLVLI
PMLAIPLIVIPGLMLQWPMAKLAKEGMRESALRNAVLVESIEGIEDIKALQAEPYFQRQW
EQTHDVSAAIGMKQRVWGARLSGWASTVQQLTYAGMLVFGSYLVLAGDITTGTLVACSLL
SSRTIAPLMQLTMVFSRWQHAKTAMTGLDDILQKPLDRPEDGKMAHCPILQGHFQLHNVQ
YSYDPEQGDTALQIGKLDIKPGEKVALLGKVGAGKSTLLKLLASQATATRGKVIIDGVDI
SQIDPADVRRQLGFLSQDSRLFFGSLRQNLMLGNPHATEQELLQALRISGALSLIQHDAA
SLDRIIHEGGRGLSGGQRQMILLSRMLLRNPQIVLLDEPTASMDEQLEGHVIHQLSSWLT
GRTLVLVTHRPALLRLADRVIVMDGGRIVADGPRDQILKAISKPAENAQSVA
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgacacaagtaaccaacactgaggtctggattgccgccatggcgcgtgccgctgcccac
tatggacaggtggtcgatatcccatcagtacgccagcagatgcgctggtacgaacagctt
cccatcgcccgccagttagagcagatcagccatctgatgggattaaccatcagcctgcgg
cacacggagaaactccgctggcgcaaccagatcttaccggtattagcggaaaccgatgac
ggcggcgtcatcgtcatcgaatcattgaatgacgaggggctcgccacctactggctgaat
gacggcggtgaccttcagcgtgaagccgaactggcggaactgattaaacacagccagggc
attatcgtgctggtcggcatcgccgagcgtggccgcgatacccgcattgatgatttcgtc
aaaccgtaccgcaagcactggttctggcagcactttcgcggcgcaaaacggcagatcggg
gaaatctctctcgcgtctatcgtgggtaacgttctggcgctggcggggattttgttctcc
atgcaggtgtatgaccgcgtcattccggcacagtcgatccccacgctgtgggtactgttt
ttcggcgtgctgctggctgccgcattagaatatgctatccgtttgtcacgcaccgtcgtc
tccgatttgatgggcaagagcatcgatctgcacgtatcggggatgctattcgcccgcgcg
cgggcgatcaaaaatgaggccagaccgaaatccaccggatcgtttatttcgcagctgcgg
gaaatcgatcaggtgcgtgaattgctgacctcgacgaccgtcggcgcagcagccgacatg
ccgttcgtctttctgtttctcggcatcatggcgatgatcggcggcccactggtgctgatc
ccgatgctagcgatcccgctgattgtgatccccggtctgatgctgcaatggccgatggcg
aagctcgccaaggaggggatgcgcgaaagtgccttgcgtaatgcggtgctggtcgagtct
atcgaagggatcgaagatatcaaagcgttacaggctgaaccctacttccagcgccagtgg
gagcagacgcacgacgtcagcgcagctatcgggatgaagcaacgcgtctggggcgctcgg
ctcagcggctgggcatcgaccgtccagcagttaacctatgccgggatgctggtattcgga
agctatctggtgctcgcgggcgatatcaccaccggtacgctcgtagcctgtagcctgctg
tcttcacgtaccatcgccccgctcatgcagctcacgatggtcttttcccgctggcagcac
gccaaaaccgcgatgaccgggctggatgacatcctgcaaaaaccgctggatcggccagaa
gacggcaaaatggcgcactgcccaatccttcaagggcatttccagctccacaacgtgcag
tacagctacgatcctgaacagggcgatacggccttgcagatagggaagctggacatcaag
ccgggtgaaaaagtggcgctgctgggtaaggtcggtgcgggtaaatccaccctgctcaag
ctacttgctagccaggcaaccgcgacgcgtggcaaggtcatcattgatggcgtcgacatc
agccagatcgatccggcagacgttcgccgccagttgggttttctgtcacaggactcccgc
ctgttcttcggcagcctgcggcaaaacctgatgctcggcaacccacatgccaccgaacag
gagctgttgcaggcgctacgcattagcggtgcgctcagcctgatccaacacgacgccgcc
agtctggatcgcattattcatgaaggcgggcgcggtttatccggtgggcagcggcagatg
atcctactcagccggatgctgctgcgcaatcctcagattgtgctgctcgatgaacctacc
gcgtctatggacgaacagttggaaggccacgttattcaccagttaagcagttggctcacg
ggtcgcacgctggtgctggtgacgcaccgcccggcgttgctcaggctggctgaccgcgta
atcgtcatggatggcgggcgcatcgtggcagacggcccgcgtgaccaaattttgaaggcc
atcagcaaaccggcagagaacgcacagagcgtggcgtaa
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