Pectobacterium polonicum: LW347_06150
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Entry
LW347_06150 CDS
T08488
Symbol
gyrA
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
ppoo
Pectobacterium polonicum
Brite
KEGG Orthology (KO) [BR:
ppoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppoo03032
]
LW347_06150 (gyrA)
03400 DNA repair and recombination proteins [BR:
ppoo03400
]
LW347_06150 (gyrA)
Enzymes [BR:
ppoo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
LW347_06150 (gyrA)
DNA replication proteins [BR:
ppoo03032
]
Prokaryotic type
DNA Topoisomerases
LW347_06150 (gyrA)
DNA repair and recombination proteins [BR:
ppoo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LW347_06150 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Beta-prop_ELP1_1st
Motif
Other DBs
NCBI-ProteinID:
UVO09539
UniProt:
A0AAE9NRI1
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Position
1373891..1376530
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AA seq
879 aa
AA seq
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MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMSVLGNDWN
KPYKKSARVVGDVIGKYHPHGDSAVYETIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM
RYTEIRMSKIAHELLADLEKETVDFVPNYDGTEQIPDVMPTRIPNLLVNGSSGIAVGMAT
NIPPHNLTEVVNGCLAYIDDENISLEGLMEHIKGPDFPTAAIINGRRGIEEAYRTGRGKI
YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKDKRIEGISALRDESDKDG
MRIVIEIKRDAVGEVVLNNLYSQTQLQTSFGINMVALHQGQPKIMPLKDILVAFVRHRRE
VVTRRTIFELRKARDRAHILEGLAIALANIDPIIELIRRAASPAEAKASLIAQAWELGSV
STMLERAGDDAARPEWLEPEFGIRDGRYYLTEQQAQAILDLRLQKLTGMEHEKLLDEYKE
LLAEIAELLYILNSPERLMEVIREELEAIKTQYSDERRTEITANSADINIEDLINQEDVV
VTLSHQGYVKYQPLSDYEAQRRGGRGKSAARIKEEDFIDRLLVANTHDTILCFSSRGRLY
WMKVYQLPEASRGARGRPIVNLLPLEPNERITAILPVREYEEGRHIFMATASGTVKKTAL
TEFSRPRSAGIIAVNLNEGDELIGVDLTDGSDEAMLFSAEGKVVRFSEQAVRSMGRTATG
VRGINLQGEDRVVSLIIPRGEGDILTVTQNGFGKRTAVSEYPTKSRATKGVISIKVSERN
GKVVGAVQVDAADQIMMITDAGTLVRTRVSEVSIVGRNTQGVTLIRTAEDENVVGLQRVA
EPVEDEELDGVVKVEGEIAEDDDAIDDIDGDDDIAEDDE
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaccttgccagagaaatcacaccggtcaatattgaagaagagctgaaaagctcg
tatctggattatgcgatgtccgttattgtcggacgtgcattaccagatgttcgagatgga
ctgaaaccggtacaccgccgcgtactgtatgcgatgagcgtactgggtaacgactggaac
aaaccgtataaaaaatccgcccgtgtcgtcggggatgtcatcggtaaataccacccgcac
ggcgactctgctgtttatgaaaccatcgtgcgtatggcgcagcctttttcactgcgctac
atgctggttgatggtcagggcaacttcggttcgattgatggcgactccgcagcggcgatg
cgttataccgaaattcgcatgtcgaaaattgctcatgaactgctggccgatctcgaaaaa
gagacggtcgattttgtgccgaactatgacggcaccgagcagattcctgacgtcatgcct
acgcgtattcccaacctgctggttaatggttcttccggtatcgccgtcgggatggcaacg
aacattccaccgcacaacctgactgaagtcgtgaacggctgtctggcgtatatcgacgat
gaaaacattagcctcgaagggctgatggaacacatcaaaggcccggatttcccgacggcg
gcgatcatcaatggccgacgcggtattgaagaggcctatcgcaccgggcgcggtaaaatt
tatatccgtgcgcgtgctgaagtggaagcggacgcgaaaaccgggcgtgaaactatcatc
gtgcatgaaattccgtaccaggtgaacaaagcacgcctgatcgagaaaattgcagagctg
gtcaaagacaaacgtattgaagggattagcgccctgcgtgatgaatccgataaagacggt
atgcgtatcgtcatcgagattaagcgcgacgctgtgggcgaagtggtcctgaataatctg
tattcccagacgcagcttcagacgtcattcggcatcaacatggtggcactgcatcagggc
cagcctaagatcatgccgctgaaagatattctggttgcatttgtgcgccaccgccgtgaa
gtggtgacgcgccgtaccatttttgaactgcgtaaagcccgtgaccgcgcccatatcctg
gaaggtctggcaattgcgctggcgaacatcgatccgattatcgaactgattcgtcgtgcg
gcgtcacctgctgaagcgaaagcctcactgatcgcacaagcgtgggaactgggcagcgtt
tctaccatgttggaacgtgcgggtgatgatgctgcgcgtccagagtggctggagccagag
ttcggcattcgtgacggtcgctactacctgacagaacagcaggcgcaggcgattctggat
ctgcgtttgcagaaactgaccggcatggagcacgaaaagctgctggatgaatataaagag
ctgttggcggagatcgccgagctgctttatatcctcaacagtcctgagcgcctgatggaa
gtgatccgcgaagagctggaagcaatcaaaacgcagtacagcgatgagcgccgcacagaa
atcacggcaaacagtgccgatatcaatatcgaagacctgattaatcaggaagatgttgtc
gtcacgctgtcccaccagggttatgtgaagtatcagccattgagcgactacgaagcccaa
cgtcgtggtggccgtggtaaatctgcggctcgtattaaggaagaagactttatcgatcgt
ctgctggtggcgaacacccacgacacgattctgtgtttctccagccgaggtcgtctgtac
tggatgaaagtgtaccaactgccggaagctagccgtggtgcgcgtggtcgtccgatcgtt
aacctgttgccgcttgagccaaatgaacgtatcacggcgattctgcctgtacgtgaatac
gaagaaggccgccatatcttcatggcaaccgcaagcggtacggtgaagaaaacggcgttg
acggaattcagtcgtccgcgcagcgcggggatcatcgcggttaacctgaacgaaggtgac
gagctgattggcgttgacctgaccgacggtagcgatgaagcgatgctgttctcagcagaa
ggcaaagtggttcgcttctctgagcaggcggtacgttccatgggccgaacggcaacgggc
gtccgtggtatcaacctgcaaggcgaagatcgcgtcgtttcgctgatcattcctcgcggt
gagggcgatatcctgaccgtcacacaaaatggctttggtaagcgtactgcggtgagtgag
tacccaaccaagtcacgtgcgacgaaaggcgttatctctatcaaggtcagcgagcgtaac
ggtaaagtggttggtgcggttcaggttgatgccgcagaccagatcatgatgatcaccgat
gcgggaacgttggtgcgtacacgcgtgtctgaagtcagcatcgttggtcgtaacacacag
ggtgtgacgctgattcgtacagcggaagacgaaaatgttgttggcctgcaacgtgttgct
gaaccggtagaagatgaagagctggatggcgtggtaaaagttgaaggcgaaattgccgaa
gacgatgatgctattgacgacattgatggcgatgatgatatcgctgaagatgacgaataa
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