Pectobacterium polonicum: LW347_06180
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Entry
LW347_06180 CDS
T08488
Symbol
menD
Name
(GenBank) 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase
KO
K02551
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:
2.2.1.9
]
Organism
ppoo
Pectobacterium polonicum
Pathway
ppoo00130
Ubiquinone and other terpenoid-quinone biosynthesis
ppoo01100
Metabolic pathways
ppoo01110
Biosynthesis of secondary metabolites
ppoo01240
Biosynthesis of cofactors
Module
ppoo_M00116
Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol
Brite
KEGG Orthology (KO) [BR:
ppoo00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
LW347_06180 (menD)
Enzymes [BR:
ppoo01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.9 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase
LW347_06180 (menD)
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GFIT
Motif
Pfam:
TPP_enzyme_M_2
TPP_enzyme_N
TPP_enzyme_C
TPP_enzyme_M
Motif
Other DBs
NCBI-ProteinID:
UVO09545
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Position
1386049..1387731
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AA seq
560 aa
AA seq
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MSTSVFNRRWATLLLESLTRHGVRHICIAPGSRSTPLTLSAADNRALICHTHFDERGLGH
LALGLAKASREPVAIIVTSGTAAANLYPAIIEAGLTGERLVVLTADRPPELIDCGANQAI
RQHALYASHPTLALDLPRPTPDIPANWLVSSVDSAMARLTHGALHINCPFAEPLYGADDG
SAYQDWLMTLGDWWNSREPWLREMRQSALAVQPDWPQWRQKRGVVLAGRVSPEQGAQLAA
WANELGWPLIGDVLSQSGQPLPCADIWLAHPEAVTLLRQADIVLQFGGSLTGKRLLQWQE
QCQPQEFWLIDDLPGRLDPAHHRGRRLVADVGEWLSAHPAEKQASWADLLVDIADRTQRQ
IDTHLASRFGDAQLAQRIPALLPPDGQLFVGNSLVVRLIDALAQLPQGYPVYGNRGASGI
DGLISTLAGVQRATSKATLGIVGDLSALYDLNALALLRQSPAPLVLIVVNNNGGQIFSLL
PTPVDQREAFYCMPQNVEFGHAAAMFGLNYVRAENWEQLADTVAGCWTQGGVTLLEVVVE
PKDGAETLNELVAQVATWAH
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacaagtgtatttaatcgccgctgggctacattgctgctggaatcgctgacccgc
catggcgtccggcatatctgcatcgcgcctggttctcgctctaccccgctgacgctgtct
gcggcagataatcgcgcactgatttgccacacgcatttcgacgaacgggggctggggcat
cttgcgctcgggctggcaaaagcttctcgtgaaccggttgcgattatcgtgacgtcaggt
actgctgctgccaacctttatccggcaattattgaagcagggctgactggtgagcggctg
gtggttttgacggccgaccgtccgccggagttgattgactgcggtgcgaatcaggcgatt
cgtcagcatgcactgtatgcttcacaccccacgctggcgctggatttaccgcgccctacg
ccagatattccagctaactggctggtttcttcggtggatagtgccatggcgcgtctgacg
cacggcgcgttgcacattaactgcccctttgctgaaccgctttatggtgctgatgatggc
tcggcttatcaagactggctgatgacgctgggtgactggtggaacagccgcgagccttgg
ctgcgtgaaatgcgccagagtgcgctagcggtgcagccggactggccgcagtggcggcaa
aaacgtggcgtcgtcctcgctgggcgcgtgagtcccgaacaaggggcacaactcgccgcg
tgggcgaacgaactgggctggccgctgattggcgatgtgctgtcgcaaagcgggcagccg
ttaccctgtgcggatatttggctagcgcatcctgaagcggtaacgcttttacggcaggca
gacatcgtcctacagtttggcggtagcctgaccggtaagcgcctgctgcaatggcaggaa
cagtgccagccgcaagagttttggttaattgacgatctgccgggacggttggacccggct
caccatcgcgggcgtcgtctggtggcggacgtgggcgaatggctgtcggcgcatccagca
gaaaaacaggcgtcgtgggcggatttgctggtggatattgccgacagaacgcagcggcag
atcgatacgcatctggcttcccgttttggtgacgcgcagctggcgcagcgcataccggcg
ttgttaccgccggatggacagctgtttgtcggcaacagtctcgttgtgcgcctgatcgac
gcgctggcgcagctcccgcagggctatccggtgtacggtaatcgtggtgccagcggcatt
gatggcctgatctccacgctggccggtgtgcagcgagccacgtcaaaagcgacgctgggc
atcgtcggcgatctctctgcattatacgatttgaatgcgctggcgctgttgcgtcagtcc
cccgcaccgctggtgttgatcgtggtgaacaataacggtggccagatattttccctgctg
ccgacgccggttgaccagcgtgaagcgttttactgcatgccgcagaatgtggagttcggc
cacgcggccgcgatgtttggcttgaattacgtgcgtgccgagaactgggaacagctggca
gacacggtggcaggttgctggactcagggcggcgtcacgctgctggaagtggtggttgag
ccgaaagacggcgcggaaacgctcaatgaactggtcgctcaggtggcgacgtgggcgcac
tag
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