Pectobacterium polonicum: LW347_06535
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Entry
LW347_06535 CDS
T08488
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
ppoo
Pectobacterium polonicum
Pathway
ppoo03030
DNA replication
ppoo03430
Mismatch repair
ppoo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppoo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LW347_06535 (holA)
03430 Mismatch repair
LW347_06535 (holA)
03440 Homologous recombination
LW347_06535 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppoo03032
]
LW347_06535 (holA)
03400 DNA repair and recombination proteins [BR:
ppoo03400
]
LW347_06535 (holA)
Enzymes [BR:
ppoo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LW347_06535 (holA)
DNA replication proteins [BR:
ppoo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LW347_06535 (holA)
DNA repair and recombination proteins [BR:
ppoo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LW347_06535 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delt_C
DNA_pol3_delta
DNA_pol3_delta_C
XTBD
Motif
Other DBs
NCBI-ProteinID:
UVO09611
UniProt:
A0AAE9NTC3
LinkDB
All DBs
Position
complement(1463054..1464079)
Genome browser
AA seq
341 aa
AA seq
DB search
MIRLYPEQLTAQLHEGLRGCYLVFGSDPLLLQESLDNIKRVAQQHEFSEHFSFILDLHTD
WDAIFSTCQALSLFASRQSLLLVLPENGPNAAMSENLVKLSGLLHPDILLILRGHKLTKA
QENSAWFKALAQDSVYINCLTPEQAQLPRWVAQRAKAMKLTLDEQATQLICYCYEGNLLA
LSQALERLALLYPDGKLTLPRVENAVNDAAHFTPFHWLDALLAGKAKRAWHILQQLKQED
CEPVILLRTLQRELLQLLALKRHMSDTPLRTLFDQQKVWQNRRDLLTQALQRLSLQQLQQ
AVRLLTQVEITLKQDYGQSVWPELESLAMLLCGKTLPEAFI
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgattcggctttaccccgaacaactcaccgcgcagctccatgaggggctgcgcggttgt
tatttggtctttggctcagatcctctcctgctgcaagaaagcctcgataacatcaaacgc
gtcgctcaacagcacgaattcagcgagcatttcagcttcattctggatctgcataccgac
tgggatgcgattttcagtacctgtcaggcgctcagcctgttcgcctcgcgccaatcgctt
ctactggtcttgccggaaaacggcccgaatgcggcgatgagcgaaaatctggtcaagctc
tctggattattgcaccctgatattttactgattctgcgcgggcataagctgaccaaagcg
caggaaaacagcgcctggtttaaagcgctggcacaagacagtgtctatatcaattgcctg
acgccggaacaagcacagctcccccgttgggttgctcaacgcgccaaagccatgaagttg
acgctggatgaacaggccacgcagctcatttgttactgttatgaaggcaaccttctcgcg
ctgtctcaggcgttagaacggctggcgctgctgtatcccgatggcaagctgacgctgccg
cgcgtagaaaatgcggtaaacgatgccgctcacttcacgcctttccactggcttgatgca
ttgctggcaggtaaagccaaacgcgcctggcacattttgcagcagctgaagcaggaagat
tgcgaacctgtcattttgctgcgtacgctacagcgcgagctgctacagctgttggcgctg
aaacgacacatgtcagacacaccgctgcgtacgttattcgatcagcaaaaagtgtggcaa
aaccggcgtgacctgctcactcaggcattacagcggctctctcttcagcagctacagcag
gccgtgcggttgctgactcaggtggaaataaccctaaagcaagactacggccagtccgtg
tggcctgaacttgaatcgcttgccatgctgctgtgcggcaaaaccttgccggaggcattc
atttga
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