Pectobacterium polonicum: LW347_06645
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Entry
LW347_06645 CDS
T08488
Name
(GenBank) ROK family transcriptional regulator
KO
K02565
N-acetylglucosamine repressor
Organism
ppoo
Pectobacterium polonicum
Brite
KEGG Orthology (KO) [BR:
ppoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppoo03000
]
LW347_06645
Transcription factors [BR:
ppoo03000
]
Prokaryotic type
Other transcription factors
Others
LW347_06645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ROK
MarR
HTH_24
Fe_dep_repress
MarR_2
HTH_IclR
HTH_Crp_2
TrmB
SMC_ScpB
DUF6041
FeoC
Motif
Other DBs
NCBI-ProteinID:
UVO09626
LinkDB
All DBs
Position
complement(1482504..1483727)
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AA seq
407 aa
AA seq
DB search
MTTGGQAQIGNVDLVKQLNSAVVYRLIDQQGPISRIQIAEQSQLAPASVTKITRQLLERG
LIKEVDQQASTGGRRAISIITENRPFHTIAVRLGRYDATIALYDLQGKALEEAHYELQEK
TQASLEGTLFQAISDFIASHQRRIRELIAISIVLPGLVDPVAGIVRYMPHISVDNWQLVE
NLQRRFNVTSFVGHDIRSLALAEHYFGATHDSLDSILVRVHRGTGAGILVNGQIFLGSNG
NVGEIGHIQIDPLGDRCHCGNFGCLETIVANGAIEQRVQHLLRQGYPSKLSENNSTISAI
CKAANRGDALAREVIEQVGLNLGKALSIAINLFNPQKVVIAGEITEAEKTLLPAIQRCIN
AQVLKEFRHNLPIQISSLNHLSAISAFALVKRAMLNGVLLQQLLENA
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgaccacaggcggacaagcgcagatagggaatgtcgatctggttaaacaattaaacagt
gcggtggtttatcgcctgattgaccagcagggtccgatctcacgaattcagatagcagaa
cagagccagcttgcccccgccagcgtcaccaaaatcacccgccagcttctggaacgtggg
ctaatcaaagaagtcgatcaacaagcctccacgggcggcagacgcgccatttcgattatc
accgaaaaccgccctttccataccatcgccgtacgccttggccgttacgacgccacgatt
gcgttgtacgatttgcagggaaaagcgctggaagaagcacactacgaactgcaagaaaaa
acgcaggcgtcgctggagggcacgctttttcaggctatcagcgactttatcgccagccac
cagcgccgtatccgcgagcttattgcaatttctatcgtactgccgggattggttgatccg
gttgcaggcattgttcgctatatgccgcacatcagcgtggataactggcaactggttgaa
aatctgcaacgtcgcttcaatgtcaccagttttgtcggtcacgacatccgcagtctggcg
ctggcagaacactacttcggtgctacccacgattcactggattctattctggtacgcgtc
catcggggtacgggtgcgggtattctcgtcaacgggcagatttttctcggcagcaacggc
aacgtgggcgagatcggtcatattcagatcgatccactcggcgatcgttgccactgtggt
aatttcggctgtctggaaactatcgtcgccaacggtgcgattgaacaacgcgtacaacat
ctgctgcgtcagggctatcccagcaaactttctgagaataacagtacgatttcggcaatt
tgcaaagcggcgaatcgaggcgatgccctcgcccgtgaggtgatagaacaggttggactc
aacctcggcaaagcgctttccatcgcgatcaatctgttcaacccgcagaaagtcgtgatc
gcgggtgaaattaccgaagcagaaaaaacgctgcttcctgcgattcaacgctgcatcaac
gcacaggtgctaaaagaatttcgtcataatctgccgattcagatctcaagtcttaaccat
ctttccgctatcagcgccttcgccttggttaaacgtgcgatgctaaacggcgtgctacta
cagcaattgctcgaaaacgcctaa
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