Pectobacterium polonicum: LW347_06800
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Entry
LW347_06800 CDS
T08488
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
ppoo
Pectobacterium polonicum
Pathway
ppoo00020
Citrate cycle (TCA cycle)
ppoo00190
Oxidative phosphorylation
ppoo00650
Butanoate metabolism
ppoo00720
Other carbon fixation pathways
ppoo01100
Metabolic pathways
ppoo01110
Biosynthesis of secondary metabolites
ppoo01120
Microbial metabolism in diverse environments
ppoo01200
Carbon metabolism
Module
ppoo_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ppoo_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ppoo_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
ppoo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
LW347_06800 (sdhA)
00650 Butanoate metabolism
LW347_06800 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
LW347_06800 (sdhA)
00720 Other carbon fixation pathways
LW347_06800 (sdhA)
Enzymes [BR:
ppoo01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
LW347_06800 (sdhA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
GIDA
Pyr_redox_2
DAO
Thi4
FAD_oxidored
FAD_binding_3
BEX
Motif
Other DBs
NCBI-ProteinID:
UVO09656
UniProt:
A0AAE9NTF1
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All DBs
Position
1517258..1519024
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AA seq
588 aa
AA seq
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MNLPVREFDAVVVGAGGAGMRAALQISQMGLSCALLSKVFPTRSHTVSAQGGITVALGNT
HEDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELEHMGLPFSRLDDGSIYQRPFG
GQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGTVVGC
TAICIETGEVVYFKAKATVLATGGAGRIYQSTTNAHINTGDGVGMALRAGVPLQDMEMWQ
FHPTGIAGAGVLVTEGCRGEGGYLLNKHGERFMERYAPNAKDLAGRDVVARSIMIEIREG
RGCEGPWGPHAKLKLDHLGKDVLESRLPGILELSRTFAHVDPVKEPIPVIPTCHYMMGGI
PTKVSGQALTVNEKGEDVVIPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRSAGIHLQ
ESLDEQGESRDASESDIEASLDRLNRWNNTRSGEDPVEIRKALQSCMQNNFSVFREGDAM
AKGLEELKVIRERLKNARLDDTSSEFNTQRIECLELDNLMETAYATAVSANFRTESRGAH
SRFDYPERDDENWLCHSLYLPQTDSMTRREVNMQPKLRPAFPPKVRTY
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgaatttgccagtcagagaatttgatgcagtcgttgttggtgcaggtggcgcaggtatg
cgcgccgcgctgcaaatctcccaaatgggcctgtcctgtgccctgttatctaaagtgttc
ccaacccgttcccatactgtgtccgcgcagggcggtattaccgttgcgctgggtaacacc
catgaggataactgggaatggcacatgtacgacaccgtaaaagggtcggattacattggc
gatcaggacgccattgaatatatgtgtaaaaccggcccggaagcgattctggaactggaa
cacatggggttaccgttctcccgtctggatgatggtagcatttatcagcgtccgttcggt
ggtcaatccaagaattttggcggcgagcaggctgcacgtaccgccgctgccgctgaccgt
acggggcatgcgttgttgcatacgctgtatcagcagaacctgaaaaatcacaccactatc
ttctccgagtggtatgccctcgatctggtgaaaaatcaggatggtacggttgtcggttgt
acggcgatctgcatcgaaaccggtgaagtggtctatttcaaagcgaaagcaaccgtgctg
gcaaccggcggtgcgggccgtatctatcagtccaccaccaatgcgcacattaatacgggt
gatggcgtaggaatggcattgcgtgccggtgttccgttgcaggacatggaaatgtggcag
ttccacccaactggcattgcgggggcgggtgtgctggtcaccgaaggctgccgtggtgaa
ggcggttatttgctgaataagcacggtgagcgtttcatggaacgctatgcgccaaacgcg
aaagatctggccggccgtgatgtggttgcccgttccattatgatcgaaattcgtgaaggc
cgcggttgtgaaggcccgtggggaccacacgccaaactgaaactggatcatctgggtaaa
gacgttctggaatcccgtctaccgggcattttggagctgtcccgcacgtttgcccacgtc
gatccggtaaaagagccgattcctgttatcccaacctgtcactacatgatgggcggtatt
ccgaccaaagtgagcggtcaggcgttgacggtgaatgagaaaggcgaagatgtggtgatt
ccagggctgtttgccgtgggtgaaattgcctgcgtgtcggtgcatggtgccaaccgtctg
ggcggcaactcattgctcgacctggtggtgtttggtcgttcagccggtattcatttgcaa
gaatcgctggatgagcagggcgaaagccgtgatgccagcgaatccgatattgaagcctcg
ctcgaccgtctgaaccgctggaataatactcgctccggtgaagatccggttgaaattcgc
aaagcgctgcaatcctgtatgcagaataacttctcggtcttccgtgaaggcgatgcaatg
gcgaaagggctggaagagctgaaagtgatccgtgagcgcctgaaaaatgcgcgtctggat
gacacctcaagcgagttcaacacccagcgtatcgagtgtctggagctggataacctgatg
gaaaccgcgtacgcgacagcggtatcggctaacttccgtaccgaaagccgtggcgcacac
agccgcttcgactacccagagcgcgacgatgaaaattggctgtgccattcgttgtatctg
ccgcaaaccgacagcatgacgcgccgtgaggtgaacatgcagcctaaactgcgtccggcg
ttcccgccgaaagtacgtacttattaa
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