Pectobacterium polonicum: LW347_07625
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Entry
LW347_07625 CDS
T08488
Name
(GenBank) type I secretion system permease/ATPase
KO
K12536
ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
Organism
ppoo
Pectobacterium polonicum
Pathway
ppoo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ppoo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LW347_07625
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppoo02000
]
LW347_07625
02044 Secretion system [BR:
ppoo02044
]
LW347_07625
Transporters [BR:
ppoo02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
LW347_07625
Secretion system [BR:
ppoo02044
]
Type I secretion system
Multiple protein transporter
LW347_07625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_16
AAA_33
AAA_29
AAA_22
AAA_18
nSTAND3
Mg_chelatase
DUF87
AAA_30
AAA
AAA_25
NACHT
PRK
Zeta_toxin
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
UVO09809
UniProt:
A0AAE9NS23
LinkDB
All DBs
Position
complement(1709358..1711205)
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AA seq
615 aa
AA seq
DB search
MPALHPALSGREIIDALAAYRRGFWGIGLFSAVINLLMLAPAIYMLQVYDRVLPSSSTMT
LAMLTIMMLGLFLLMGLLEWIRSAVVIRLGTQMDMRLNQRIYNAAFESNLKNGTAGAGQA
LNDLTALRQFATGNALFAFFDAPWFPVYLLVIFLLHPWLGAMALAGAIILIVLAWLNQKL
TREPLALAAQNTVQATQQANANLRNADAIEAMGMLPAMRERWLTQHKAFLYYQNVASEKS
ANITSLTKSTRLALQSLMLGLGALLAVNGDITPGMMIAGSILVSRVLSPIDQIIGVWKQW
MQARLAWQRVNILLDNHPARPVGMALPAPAGRLQVEQLSANAPNSRTPILANITFELAPG
DVLGVLGPSGSGKSTLARLLVAAMPALGGKVRLDGADMHQWDKGELGRFIGYLPQDVQLF
NGTIAENIARFTQPDAEKIAAATIAAGVHEMILRLPQGYDTQLGESGAGLSGGQKQRVAL
ARAIYNQPRLIVMDEPNASLDDDGEKALLAAIAAQQEAKSTQVLITHKPALLSCANKLLV
LRAGQIQYFGATEQVLKELQRAKPAKAPIATPPSTKPAPVKTADAANAFIPKEPSSAGLS
MVYSAPASRRAAPDK
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcactccatccggcgctatcaggccgggagatcattgacgcgctggccgcctat
cgtcgggggttctggggaattggcctgttcagcgccgtcatcaacctgctgatgctggca
ccagccatttatatgctccaggtttatgaccgcgtcctgccttccagcagcaccatgacg
ctggcgatgctgacgatcatgatgctgggcctgtttttattgatgggattactggaatgg
atacgcagcgccgtggtgatccgactcggtacacagatggatatgcggttgaatcagcgc
atctacaatgcggcgtttgaaagcaatctcaagaatggcacggcgggagccggacaagcc
ttaaacgatcttaccgccctgcgccagttcgctaccggaaacgcactgtttgccttcttt
gatgcgccatggtttccagtttaccttctggtgatcttcttacttcatccctggctgggc
gcaatggcgctggcgggggcgatcatcctgattgtgctggcctggctgaatcaaaaactc
acgcgcgaacccttggccttagccgcacaaaacacggttcaggcaacacagcaggctaac
gctaacctgcgcaacgccgatgctatcgaagccatgggaatgctgcccgccatgcgcgag
cgctggctgacgcagcataaagcctttctctattatcagaatgttgccagcgaaaaaagc
gccaacataacgtcgctgacgaaaagcacccggctagcacttcagtcgctgatgctgggt
ctgggcgcgctgctggccgtcaacggcgatatcacgccgggtatgatgatcgcgggttcc
attctggtcagtcgcgttctcagcccaatcgatcaaatcattggcgtctggaagcagtgg
atgcaggcacgtctcgcctggcaacgtgtcaacatcctgctcgataatcacccggcacga
cctgtcggcatggcacttcccgcaccagcagggagactccaggtcgagcaactcagcgcc
aacgcccccaactcccgaacgcccatactcgccaatattacgtttgaactggcccccggc
gatgtgctcggcgtcttaggcccttccggttccggtaaatccaccctcgctcgcctgctg
gttgcggccatgcccgccctcggcggcaaagtcaggctagatggcgcagacatgcaccaa
tgggacaaaggcgaactgggtcggttcatcggctatctcccgcaggatgttcagcttttt
aacgggacgattgccgaaaacatcgcgcgcttcactcagccggatgcagaaaagatcgcc
gccgccaccatcgcggcaggtgtccacgagatgattctacggttgccacagggctatgat
acgcagttaggtgaaagcggtgctggactatccggcggtcaaaagcagcgtgtcgctctc
gccagagccatttacaaccagccgcgcctgattgtgatggatgaaccgaatgccagcctg
gatgacgatggcgagaaagccttattggccgcgattgccgcccaacaggaagccaaaagc
acgcaggtgctgatcacgcataaacccgcactactttcctgcgccaataagctgttagtc
ctgcgcgccggacaaatccagtatttcggtgcaacagagcaggtgctgaaagaactacag
cgtgccaagcccgccaaggctcctatcgccacaccgcccagcacgaaacctgcgccagtt
aagacagccgacgccgcaaatgcctttatcccaaaggaaccgagttcagccggactaagt
atggtgtacagcgcaccggcgtctcgccgtgccgcaccggataaatga
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