Pectobacterium polonicum: LW347_08650
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Entry
LW347_08650 CDS
T08488
Symbol
nfo
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
ppoo
Pectobacterium polonicum
Pathway
ppoo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppoo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LW347_08650 (nfo)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppoo03400
]
LW347_08650 (nfo)
Enzymes [BR:
ppoo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
LW347_08650 (nfo)
DNA repair and recombination proteins [BR:
ppoo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
LW347_08650 (nfo)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
UVO09996
UniProt:
A0AAE9T1M6
LinkDB
All DBs
Position
complement(1931768..1932613)
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AA seq
281 aa
AA seq
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MKYIGAHVSAAGGVDQAVIRAHEIKATAFALFTKNQRQWQAAPLSTEVIDRFKAACEQYA
YAPAQILPHDSYLINLGHPDEEALEKSRIAFIDEMSRCQQLGLSLLNFHPGSHLKQIEEA
DCLARIAKSINIALAETDGVTAVIENTAGQGSNLGFHFEHLAAIIDGVEDKSRVGVCIDT
CHAFAGGYDLRTEADCEATFAEFDRIVGFRYLRGMHLNDAKSTFGSRVDRHHSLGEGNIG
KTAFSYIMKDPRFDGIPMILETVNPDIWADEIAWLKSEAQR
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgaaatacatcggggcgcacgttagcgcagcaggcggtgtcgatcaggccgtgattcgc
gcacatgaaataaaggcgacggctttcgctttatttaccaagaaccagcgccaatggcag
gctgcaccgctcagcacagaggttattgaccgttttaaagccgcgtgtgaacagtacgcc
tacgcaccagcacagattctaccccacgacagttatctgattaatctgggtcacccggac
gaagaagcgctggaaaaatcacgcatcgcgtttattgatgaaatgtcacgctgccaacag
cttgggctaagcctgctgaattttcaccccggtagccatctgaaacagattgaggaagcg
gattgtctggcacgtattgccaaatccattaacatcgcgctggcggaaacggacggggtc
accgcggtcattgagaataccgccgggcaaggcagtaatttgggttttcactttgagcat
ctggcggccatcatcgacggcgtagaagataaaagccgcgtcggcgtctgtatcgatacc
tgccacgcgtttgccggtggctatgacctgcggacggaagctgattgcgaagcgactttt
gctgaattcgatcgcattgttgggttccggtatttgcgcgggatgcatttaaatgatgcg
aaaagtacgttcggcagccgggttgaccgacaccacagtctgggggaaggcaatatcggc
aaaaccgctttcagctacatcatgaaagatccccgttttgacggtattccgatgattctg
gaaacggtcaatcctgatatctgggccgacgaaatcgcctggctcaaatccgaagcgcag
cgctaa
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