Pectobacterium polonicum: LW347_08740
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Entry
LW347_08740 CDS
T08488
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
ppoo
Pectobacterium polonicum
Brite
KEGG Orthology (KO) [BR:
ppoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppoo03009
]
LW347_08740 (rimO)
Enzymes [BR:
ppoo01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
LW347_08740 (rimO)
Ribosome biogenesis [BR:
ppoo03009
]
Prokaryotic type
ribosomal protein modification factors
LW347_08740 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
YajR_YAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
UVO10011
UniProt:
A0AAE9T1N0
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All DBs
Position
complement(1954510..1955823)
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AA seq
437 aa
AA seq
DB search
MQQPRIGFVSLGCPKNLVDSERILTELRTEGYQVVPRYDDAELVIVNTCGFIDSAVQESL
EAIGEALNENGKVIVTGCLGAKENQIREVHPKVLEITGPHSYEQVLSHVHQYVPKPTHNP
FTSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLDSRPIGSVLDEAKRLADA
GVKELLVISQDTSAYGADVKQRTGFWNGQPVKTSMVSLCEQLASLGVWVRLHYVYPYPHV
DDVIPLMAEGKILPYLDIPLQHASPKILKLMKRPGAVERTLERIKRWREICPDLTLRSTF
IVGFPGETEEDFQMLLDFLQEAKLDRVGCFKFSPVEGASANALPDQVPEEVKEERFHRFM
QLQQAISTQRLQDKIGREVLVLIDEIDEEGAIGRSMADAPEIDGAVYLNGETDVKVGDIV
KVKIEHADEYDLWGSRV
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaaccacgtatcggctttgtttccctcggttgcccgaaaaacctcgtcgactcc
gagaggattctgaccgaactgcgtactgaaggttatcaggtcgtgccacgttatgacgac
gctgaactggtgatcgtcaatacctgtggttttattgacagcgccgtacaagagtcgctg
gaagccatcggcgaagcgctgaatgaaaatggcaaagtcatcgtgacgggctgtctgggt
gccaaagaaaaccaaatacgcgaagtgcatccaaaagttctggaaattaccggtccgcac
agctacgagcaagtgctgtcacacgtccatcaatatgtccctaaaccgacgcacaacccg
tttaccagcctggttcccgagcaaggtgtgaaactcacgccgcgccattacgcctatctg
aaaatctcagaaggctgtaaccaccgctgtacgttctgcatcatcccttccatgcgtggc
gatctcgatagccgtccgattggttcggtgctggatgaggcgaaacgtttggctgatgct
ggcgtaaaagaactgctggtgatttctcaggatacttcggcatacggcgcggatgtgaag
caacgcactggcttttggaacggacaaccggtcaaaaccagtatggtcagcctgtgtgaa
caactggcatcattgggcgtgtgggtgcgtctgcactacgtctacccttacccgcacgta
gacgatgtgatcccattaatggcggaaggtaaaatcctgccttatctggatatcccgctc
caacacgccagcccgaagattctcaaactgatgaaacgtccaggcgcggtagaaagaacg
ctggaacgcattaagcgctggcgtgaaatctgcccagacttaacgctgcgttcgaccttt
attgtcggctttcctggcgaaacggaagaagatttccagatgctgctcgatttcctacag
gaagccaaactcgaccgcgtgggctgttttaaattcagcccggtcgaaggtgcgtcggca
aatgcattgcccgatcaggtgccggaagaggttaaagaagaacgtttccaccgcttcatg
caattgcagcaggcgatctccacccagcgtttgcaggacaaaattggtcgtgaagtgctg
gtgctgatcgacgaaatcgatgaagaaggtgcaattggccgcagcatggccgatgcccct
gaaattgacggtgcagtttacctgaacggtgaaactgacgtgaaagttggtgacatcgtc
aaagtaaaaattgagcacgcagacgaatacgatctgtggggtagccgcgtttag
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