Pectobacterium polonicum: LW347_09245
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Entry
LW347_09245 CDS
T08488
Symbol
msbA
Name
(GenBank) lipid A ABC transporter ATP-binding protein/permease MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
ppoo
Pectobacterium polonicum
Pathway
ppoo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ppoo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LW347_09245 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppoo02000
]
LW347_09245 (msbA)
Enzymes [BR:
ppoo01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
LW347_09245 (msbA)
Transporters [BR:
ppoo02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
LW347_09245 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
DEAD
Zeta_toxin
DUF87
SLFN-g3_helicase
AAA_22
AAA_16
APS_kinase
AAA_29
RsgA_GTPase
ABC_membrane_2
AAA
AAA_30
AAA_25
AAA_18
G-alpha
MMR_HSR1
nSTAND3
AAA_15
NB-ARC
HUTI_composite_bact
Motif
Other DBs
NCBI-ProteinID:
UVO10477
UniProt:
A0AAE9T392
LinkDB
All DBs
Position
2072055..2073803
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AA seq
582 aa
AA seq
DB search
MLNDKDLSTWQTFRRLWPMISPFKAGLAAAAIALIINAAGDTLMLSLLKPLLDEGFGKAE
RSVLLWMPLVVIGLMLVRGLSGFVSSYCVAWVSGKVVMNMRRRLFSHIMGMPVAFFDQQS
TGTLLSRITYDSEQVAASSSGALITVVREGASIIGLFILMFYYSWQLSIILIVIAPIVSI
AMRLVSKRFRNISKNMQDTMGHVTTSTEQMLKGHKEVLMFGGQEVETKRFDQVSNRMRQQ
GMKMVSASSISDPIIQLIASLALAFVLYAASFPSVMETLTAGTITVVFSSMIALMRPLKS
LTNVNAQFQRGMAACQTLFAILDMEQERDTGKLEIERAKGDLEFRQVNFAYPGRENLALK
NINLHVPVGKTVALVGRSGSGKSTIASLITRFYDIQSGEILLDGHDLREYSLSSLRNQVA
LVSQNVHLFNDTIANNIAYARNEHYSREEIERAAKMAYATDFINKMENGLDTVIGENGVM
LSGGQRQRIAIARALLRNSPILILDEATSALDTESERAIQAALDELQKDRTALVIAHRLS
TIEKADEILVVEDGRIIERGNHAALLATNGAYAQLHRMQFGE
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgctgaatgataaagatctctccacctggcagacttttcgccgcctatggccgatgatc
tctccttttaaggcagggcttgctgctgctgcaatcgcgctcattattaatgcagctggc
gatacattaatgctctctctgctaaaacccttgctggatgaaggattcggtaaggcggaa
cgttcagtattgctctggatgccactggttgttattgggttgatgttagtgagggggcta
tcaggctttgtctccagctactgcgttgcctgggtttccggcaaagtggtgatgaatatg
cgccgccgccttttttctcacatcatggggatgccggtagcgtttttcgaccaacagtcg
acagggacgctgttatctcgtattacctatgattctgagcaggttgcggcttcgtcatct
ggcgcgttgattaccgtcgtcagagaaggtgcgtcgatcattggcctgtttatcctgatg
ttctactacagttggcagttgtccatcatcctgattgtgattgcgccgattgtgtcgatc
gctatgcgtctggtgtccaaacggttccgtaatatcagtaaaaacatgcaagataccatg
ggacacgtcaccaccagcacggagcaaatgctgaaagggcataaagaagtgctaatgttt
ggcggtcaggaagttgaaaccaaacgtttcgatcaggttagtaaccggatgcgtcagcag
ggcatgaagatggtatccgcctcttcaatttccgatcctatcattcagttgatcgcgtcg
ctggcgctggcgtttgtcttgtatgctgccagtttccctagtgtgatggagacattgact
gccgggacgatcacggtggtgttctcttccatgattgcgctgatgcgcccgctaaagtca
ctcactaacgtgaatgcccagttccagcgcgggatggcagcgtgccaaacgttgttcgcc
attctggacatggagcaggagcgtgatactggcaaattggaaatcgaacgagcgaaaggt
gacctcgaattccgccaggtgaatttcgcttacccgggaagagaaaatctggcgctgaaa
aatatcaatctgcatgtccccgttggtaaaacggtggcattggttggccgctctggttca
ggtaaatcgacaattgccagtttgatcacgcgtttttacgatattcaatctggtgaaatt
ttacttgatggccatgatttgcgcgaatatagcttgtcttccttgcgtaatcaggtggcg
ttagtttctcagaatgtgcacctatttaacgatacgatagcgaacaatatcgcttatgcc
cgcaatgagcactatagccgtgaggaaattgagcgtgcggcgaaaatggcgtatgcgacc
gatttcatcaacaagatggaaaatggtctggacacggttattggtgaaaatggtgtgatg
ctctcaggcggccaacgccaacgtatcgcgattgctcgtgcgctactgcgcaatagtccg
atcctgatattggatgaggccacgtcggcgttggataccgaatctgaacgcgcgattcag
gctgcgttagatgagttgcagaaagatcgtaccgcgctggttatcgcacaccgtctttcc
acgattgaaaaagcagatgaaattctggtggttgaagatggaagaatcattgaacgcggt
aaccatgctgcgttgttagcgacgaacggtgcctatgcacagttgcatagaatgcagttt
ggcgaatga
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