Pectobacterium polonicum: LW347_09545
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Entry
LW347_09545 CDS
T08488
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
ppoo
Pectobacterium polonicum
Pathway
ppoo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppoo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LW347_09545 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppoo03400
]
LW347_09545 (ruvB)
Enzymes [BR:
ppoo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LW347_09545 (ruvB)
DNA repair and recombination proteins [BR:
ppoo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LW347_09545 (ruvB)
RecFOR pathway proteins
LW347_09545 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
AAA_22
TIP49
AAA_16
AAA_3
AAA_14
nSTAND3
Rad17
AAA_2
AAA_18
AAA_17
RNA_helicase
NTPase_1
Bac_DnaA
AAA_28
AAA_24
TsaE
NB-ARC
ABC_tran
NPHP3_N
bpMoxR
Motif
Other DBs
NCBI-ProteinID:
UVO10155
UniProt:
A0AAE9NS79
LinkDB
All DBs
Position
2144373..2145377
Genome browser
AA seq
334 aa
AA seq
DB search
MIEADRLISADAIPEEEFLDRAMRPKLLKEYVGQPQVREQMEIFIQAARKRGDALDHLLI
FGPPGLGKTTLANIVANEMGVNMRTTSGPVLEKAGDLAALLTNLEPHDVLFIDEIHRLSP
VVEEVLYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLIGATTRAGSLTSPLRDRFGIVQR
LEFYNVADLQYIVGRSAQCLGLDLTPEGSLEVARRARGTPRIANRLLRRVRDFSEVKSEG
AITGAVATQALDMLAVDTEGFDYMDRKLLLAIIDKFMGGPVGLDNLAAAIGEERETIEDV
LEPFLIQQGFIQRTPRGRMATQHAYRHFGLTREE
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgatagaagccgatcgtttaatttccgctgacgctattcccgaagaagaatttctcgac
cgcgcaatgcgccctaagctgctgaaagagtatgtgggccagccacaggtgcgtgagcag
atggaaattttcattcaagccgctcgcaaacgtggggatgcgctggatcacctgctaatt
tttggtcctcctggcttgggtaaaacgacgctggcgaatattgtcgccaatgagatgggc
gtgaatatgcgcaccacgtcgggcccggtgctggaaaaagcgggcgaccttgctgcgttg
ttgaccaatctcgaaccgcatgatgtcttgtttatcgatgaaattcatcgcttgtcgcct
gtggtggaagaagtgctgtatccggcgatggaagattatcaactggatatcatgatcggc
gaggggccagcggcccgctcaattaaactcgatttacctcctttcacgctgattggcgca
acgacgcgtgcggggtcgttaacctcgccgctgcgcgatcgttttggcattgtgcagcgt
ctggaattttataatgtggcggatttgcagtatatcgttggccgcagcgcacagtgcctg
gggctggatctgacaccggaaggttcccttgaagtggcccgtcgtgcgcgtggcacgccg
cgtattgctaaccggctattgcgccgggtacgtgatttctctgaggttaaatcggaaggt
gcgattaccggagccgtagcgacgcaggcgttggatatgctggcggtggataccgaaggt
tttgactacatggatcgtaagctgctgttggcgatcatcgataaattcatgggcggtcct
gtcgggctggacaatttggccgcagcgattggcgaagaacgtgaaactatcgaagatgta
ttggaaccgtttcttattcaacaagggtttattcagcgtacaccgcgtggtcgcatggcg
acgcagcatgcctatcggcattttggcttaacgcgtgaagagtag
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