Pectobacterium polonicum: LW347_11790
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Entry
LW347_11790 CDS
T08488
Symbol
pspF
Name
(GenBank) phage shock protein operon transcriptional activator
KO
K03974
psp operon transcriptional activator
Organism
ppoo
Pectobacterium polonicum
Brite
KEGG Orthology (KO) [BR:
ppoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppoo03000
]
LW347_11790 (pspF)
Transcription factors [BR:
ppoo03000
]
Prokaryotic type
Other transcription factors
Others
LW347_11790 (pspF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
Mg_chelatase
AAA_2
AAA_16
AAA
AAA_7
UPF0175
Motif
Other DBs
NCBI-ProteinID:
UVO06617
LinkDB
All DBs
Position
2641093..2642079
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AA seq
328 aa
AA seq
DB search
MLQEKENLLGEANSFLEVLEQVSQLAQLNKPVLVIGERGTGKELIASRLHYLSPRWQGPF
ISLNCAALNENLLDSELFGHEAGAFTGAQKRHLGRFERADGGTLFLDELATAPMLVQEKL
LRVIEYGMLERVGGRDQLQVDVRLVCATNDDLPALAASGKFRADLLDRLAFDVVQLPPLR
ERQQDIMLLADNFAIQMCRELHLPLFPGFTATARETLLNYDWPGNIRELKNVVERSVYRH
GDSEQPLDAIILNPFRRTTAVQEKRQTAAGQPDLPLDMKPWLLEQEKGLIERALNQAKFN
QRKAAELLGLTYHQLRGLLKKHDIAVNE
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaggaaaaagagaatctgctgggcgaagccaacagctttttagaggttctggaa
caggtgtcgcagctggcgcaactgaataaaccggtgctggtaatcggtgaacgtggaacc
ggcaaagaactgatcgccagccgcctacactacctttccccacgttggcaagggccgttc
atttccctcaactgcgcggcactcaacgagaatctgctcgattccgaactatttggtcat
gaagccggtgcctttaccggagcgcagaagcgccatctaggacgcttcgaacgcgccgac
ggcggaacgctatttttagatgagctagccaccgcgccgatgctggtgcaggaaaaatta
ctgcgagtgatcgaatacggcatgcttgagcgcgtcggcggcagagatcagctacaggtt
gatgtgcgtctggtgtgcgccaccaacgacgatctgcctgcgctggctgccagcggtaaa
ttccgtgccgacctgctcgatcgtctggcctttgacgtcgtgcaacttccgccgctgcgc
gagcgccagcaggacattatgttattagcagataattttgcgattcagatgtgccgcgaa
ttgcacttgccgctgtttcccggttttaccgctaccgcacgcgaaacgttgctgaattac
gactggccgggcaatattcgtgaattgaaaaacgtagttgaacgttcggtgtatcgtcac
ggcgatagcgagcagccccttgatgccatcattttgaatcctttccgccggactaccgcc
gttcaggaaaaacgacagacagcagcggggcagccggatttaccgctggacatgaaaccg
tggctgctggaacaagagaaaggcttgatcgaacgggcgttaaatcaagcaaaatttaac
cagcgcaaggccgcagaactgctgggattaacctaccaccagttgcgtgggttattgaag
aaacacgatatcgcggtgaatgagtaa
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