Pectobacterium polonicum: LW347_12345
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Entry
LW347_12345 CDS
T08488
Name
(GenBank) heme lyase CcmF/NrfE family subunit
KO
K04016
cytochrome c-type biogenesis protein NrfE
Organism
ppoo
Pectobacterium polonicum
Brite
KEGG Orthology (KO) [BR:
ppoo00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99982 Energy metabolism
LW347_12345
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Gene cluster
GFIT
Motif
Pfam:
CcmF_C
Cytochrom_C_asm
GASH
Motif
Other DBs
NCBI-ProteinID:
UVO06720
UniProt:
A0AAE9NKI2
LinkDB
All DBs
Position
complement(2755564..2757438)
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AA seq
624 aa
AA seq
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MLLLPEFGYVALSLAGGVGAATALLTFSGYSLRWSGTYRLARCWTLVLFGLVLFAFGALT
LSVVQDDFSVNYVAQHSHRDLPLGLKIAAVWGGHEGSLLLWLLCLSGWSAAFACRYRKAT
SALFPLTMAMLAVIATALLVFIVFFSDPFVRLFPPAVAGRDLNPMLQHIGLILHPPLLYL
GYGGLTVSAALALASLIHGEFTAPAAWICWRWTLPAWSLLTLGIILGSWWAYNELGWGGW
WFWDPVENASLLPWLTASALLHSLSVTRMRGIFRHWSLILALLTFILCLLGTLIVRSGIL
VSVHAFALEHDRAVPLFILFACLSMAALAVYGWRAQFVHSAARFSGWSREMAILLVLLLF
SAVALVVVLGTLYPMIYGLAGWGKISVGAPYFNRVLLPFGGLMLLLIGVAAGGYWKRSTQ
WPARRLAITLAMGVVTTLGLWPYGYAVALATGLIVWVMAAQWLQPLSAIRQQLPALLAHT
GVALFALGIAFSAGSKQEISVNIGQGEQVTLGDYHFRFLQLDLVAAQNYTAEQAVIAIYR
GDSPIAQIMPERRYYNARKQQMIEPGIAWGPIREWYAVMGEKTGENRYAMRFYVQTGVRW
VWGGGMLMVAGALLGWFRGRRVYD
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgttgttattgccagaatttgggtatgtggcgctgtcgctggcgggtggtgttggcgcg
gcgacagcgttgctgaccttttcaggctactccctgcgctggtcgggtacttaccgactg
gcgcggtgctggacgctagtgctatttggtcttgtgctgttcgcattcggcgcgctgacg
ctgagcgtggtgcaggatgatttctccgttaattatgtcgcacagcatagccaccgtgat
ttaccccttgggctaaaaatagccgcggtttggggcgggcatgaagggtcgctgctgctg
tggctgttatgtttgtccggttggagcgctgcgtttgcctgccgctatcgcaaagcgacg
agtgcactgtttccgctgacgatggcgatgctggccgtgatagcgaccgcgctgctggta
ttcattgtctttttctccgatccttttgtgcgcctcttcccgcctgcggtggcggggagg
gatctcaacccgatgttgcaacatattggccttattctccatccaccgttgctctatctg
ggctatggcgggttaaccgtgagtgcggcactggcattagcctccctgattcacggcgag
tttacggctccggccgcctggatttgctggcgctggacgctgcctgcctggagcctgtta
acgctgggcatcattctgggatcgtggtgggcctataacgaactgggctgggggggatgg
tggttctgggacccggtagaaaacgcctcattgctcccgtggttaacggctagcgcactg
ctccacagtctgtctgtcacgcgaatgcgcggtatcttccggcattggtcgctgatattg
gcgctgttgacgttcattttatgcctgttgggcacgctgatcgtgcgctctgggatactg
gtctcggttcacgctttcgccctcgaacatgaccgtgcggtgcctttatttatcctgttt
gcttgtttaagcatggcagcgctagccgtttatggctggcgcgcccagtttgttcattct
gctgcccgtttctctggctggtcgcgggaaatggcgatactgctggtgctgctgttattc
agtgccgtggcgctggtagtcgtgcttggcaccctttatccgatgatttatggcttggca
ggttggggaaaaatctcggtgggtgcgccctattttaaccgcgtactcttgcccttcggt
ggcctgatgttgctgcttattggggttgctgccggaggttactggaagcgcagtacgcag
tggcctgcccggcgtttagccataacgctggcgatgggggttgtcaccactctgggctta
tggccgtatgggtacgctgtcgcactggctacaggcctgatcgtctgggtgatggcggca
cagtggctacagccgctgtcggcgatacgacagcagcttcctgcactgctagcacatact
ggcgtggcactgtttgctttgggcatcgcgttttctgcgggtagtaagcaggaaatcagc
gtcaatatcggtcagggagagcaggttacgttgggtgactatcattttcgatttttgcag
ctggatttagtggcggcgcagaattacaccgcagaacaggctgtgattgcgatctatcgt
ggcgattcgccgatcgcccaaatcatgccggaacgtcgttactacaacgcacgcaaacag
cagatgattgaaccgggcattgcctgggggccaatcagagaatggtatgccgtgatgggc
gagaaaaccggcgaaaaccgctatgcgatgcgtttctatgtgcagactggcgttcgctgg
gtatggggcggtggcatgttaatggtcgcgggcgcactgctggggtggttccgagggaga
agggtctatgactaa
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