KEGG   Pectobacterium polonicum: LW347_12925
Entry
LW347_12925       CDS       T08488                                 
Symbol
helD
Name
(GenBank) DNA helicase IV
  KO
K03658  DNA helicase IV [EC:5.6.2.4]
Organism
ppoo  Pectobacterium polonicum
Brite
KEGG Orthology (KO) [BR:ppoo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ppoo03400]
    LW347_12925 (helD)
Enzymes [BR:ppoo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     LW347_12925 (helD)
DNA repair and recombination proteins [BR:ppoo03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    LW347_12925 (helD)
SSDB
Motif
Pfam: Helicase_IV_N UvrD-helicase AAA_19 UvrD_C UvrD_C_2 AAA_30 AAA_12 DEAD AAA_11 ResIII
Other DBs
NCBI-ProteinID: UVO06825
UniProt: A0AAE9NKQ3
LinkDB
Position
complement(2876593..2878650)
AA seq 685 aa
MELKSTSLGKHLAQHPYNRVRLLNAGVEVSGDKHEYLIPFNQLLNIHCKRGLVWGELEFE
LPAGKVVRLHGTEWQETQAFYRHLLKSWLGWSEEMSLICAEVLLRQMDSIHTLTQQDKWF
SRQALSTLQSAVRNSLESLPLPIARLDTFDNCRDNYQHCLRWLEQGDEMRTAANQAWMER
TLAAEQPFFETVESSPLNVSQSKAVMNGEEGVLVLAGAGSGKTSVLVARAAWLMHRQEAA
PDQILLLAFGRKAAEEMNERIQERLHTDEIQAKTFHALALHIIQQASRKAPMISQLESDA
KQRRELLISHWQQQCAEKKTQANGWRRWLTEELEWDVPDGDFWNDSKLAARLAGRLERWL
GLMRMHGGSQSEMVEQAPESIRAEFQQRIRLMAPLLKAWKKALKDENAVDFSGLIHQAVN
LLDKGRFVSPWKHILVDEFQDISPQRASLLAALRRQNSRTCLFAVGDDWQAIYRFSGAEL
ALTTGFEQHFGVGEQCALDTTYRFNERIGEIANTFIQQNPYQLKKPLNSLSKGDKKAVTI
LPQEQLEPLLDKLSGFAKADERILVLARYHHLRPAILEKAATKWPNLHIDFMTVHASKGQ
QAEYVIIVGMHEGKDGFPAPARESVIEAALLPEPENFPDAEERRLLYVALTRAKHRVWLL
QDMATPSVFVEHLQRLGVPAQRKPG
NT seq 2058 nt   +upstreamnt  +downstreamnt
atggaactgaaatctacctcattaggtaaacatctggctcagcatccttacaaccgggtg
cggttactgaatgcgggtgtcgaagtgagtggcgataaacatgaatacctgattcctttt
aatcagttgctgaatattcactgtaaaagagggttggtgtggggtgagctagagtttgaa
ttgccagccggaaaagtggtgcgtttgcatggtactgagtggcaggaaacgcaagctttt
taccgccaccttctcaaatcctggcttggctggagcgaggagatgagtctgatctgtgct
gaggttttgctgcgtcaaatggacagcatccatacgctgacgcagcaggataaatggttt
agccgtcaagctctatcaacgttgcagagtgctgtccgcaattcgctggagtctctgcct
cttcctattgctcgccttgataccttcgataactgccgtgataactaccaacattgcttg
cgttggcttgagcagggggacgagatgcgcactgcggcgaatcaggcatggatggaacgc
acgttggcagcagagcagcctttctttgaaacggtagagagttcgccattaaatgtgtct
cagagcaaagcagtgatgaatggcgaagagggcgtgctagtgctggcgggcgcaggcagt
ggtaaaacgtccgtgttggtggctcgtgcagcctggctaatgcatcgtcaagaagctgcg
cccgatcagattttgctgctggcatttggccgtaaagcggcagaagagatgaacgagcgc
attcaggaacggcttcatacggatgagattcaggctaagacattccatgcgctggcattg
cacatcattcagcaggctagccgtaaggcaccgatgataagccagcttgaaagtgatgca
aaacagcgccgcgagctgttgatttcacactggcaacagcaatgtgccgagaaaaaaacg
caggcgaatggatggcggcgttggttaacggaagagctggagtgggacgtgccagacggc
gatttctggaacgattcgaagctggcggctcggctggctggacggcttgagcgctggctg
ggattgatgcgtatgcacggtggtagccagagcgaaatggtggagcaagcgccagaatcg
attagggctgaatttcagcaacgtattcgcctgatggcaccgttattgaaagcctggaaa
aaagcgcttaaggacgaaaacgcagtcgacttctctggccttatccatcaggccgtgaac
ttgctggataaagggcgttttgtcagtccctggaaacatattctggtcgatgaatttcag
gatatctcaccacagcgcgcgagtttgcttgctgcgctgcggcgacaaaatagccgtacc
tgcctgtttgccgtaggggatgactggcaggcaatttatcgtttcagcggtgcagaattg
gcgttaacgacgggcttcgaacagcattttggcgtaggtgaacagtgcgcgctagatacg
acctatcgttttaatgaacgcattggtgaaattgccaacacgttcatacaacagaatccg
tatcagttaaagaaaccgcttaatagtttgagtaagggggataaaaaagcggtaactatc
ctacctcaggagcagcttgaaccactcttggataaattgagcggctttgctaaagccgat
gagcgtattctcgtgcttgctcgctatcatcatttgcgccctgctattttagagaaggct
gcgaccaaatggccgaatttacatattgatttcatgacggtgcatgccagtaaaggtcag
caggctgagtatgtcattattgtagggatgcatgagggtaaagatgggttcccggctccg
gcaagagaatccgtgattgaggccgcactgttacctgagcctgagaatttccctgatgcg
gaagagcgtcgcttgctgtatgtcgcgttgacgagagcgaagcatcgcgtctggctgtta
caggatatggcaaccccctcagtgtttgttgagcatcttcagcgcttaggtgtgccagca
cagcgtaagcccggataa

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