Pectobacterium polonicum: LW347_14330
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Entry
LW347_14330 CDS
T08488
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
ppoo
Pectobacterium polonicum
Brite
KEGG Orthology (KO) [BR:
ppoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppoo03016
]
LW347_14330 (truA)
Enzymes [BR:
ppoo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
LW347_14330 (truA)
Transfer RNA biogenesis [BR:
ppoo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LW347_14330 (truA)
Prokaryotic type
LW347_14330 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
UVO07082
UniProt:
A0AAE9NQ48
LinkDB
All DBs
Position
complement(3184668..3185519)
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AA seq
283 aa
AA seq
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MSDTTQAAAIQATAVAENERATLKIALGIEYDGSQYYGWQRQSDVASVQACLEKALSKVA
DEPIEVFCAGRTDAGVHGTGQVVHFTTQAIRKEAAWTMGVNANLPPDIAVRWVKTVDEDF
HARFSATARRYRYIIYNHRYRPAVLSHGMTHFYHPLDVERMERAGQCLLGENDFTSFRAV
QCQSRTPWRYVNHLKVTRHGDYIVVDIKANAFVHHMVRNIVGSLMDVGCGNRPESWIAEL
LAAKDRTLAGATARAEGLYLVAVDYPARFALPRPTMGPLFLAD
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgtcggataccactcaggcggcggcgattcaagccaccgccgttgcggaaaacgaacgc
gccacgctgaaaattgcgctgggcattgagtatgacggtagccagtattatggctggcag
cgtcagagtgatgtcgctagcgtacaggcctgtcttgaaaaggcgctaagcaaagttgcg
gatgaaccgatagaagtgttttgtgccggacgaaccgatgctggggttcatggaactggg
caggttgtgcatttcaccacgcaggcgatcagaaaagaggccgcctggacgatgggcgta
aatgcgaatttaccgccggacatcgccgtgcgttgggtgaaaacggtagatgaagatttc
catgcgcgcttcagcgcaacggcgcgccgctaccgctatattatctacaatcaccgctat
cgccccgcggtgctttcgcatggcatgacgcacttttatcatccgttggatgtggagcgg
atggaacgcgcagggcaatgcctgttgggggagaatgatttcacctcttttcgggcggtg
cagtgccagtcgcgcaccccgtggcgctatgtaaatcatttaaaggttacacgtcacggt
gactatatcgtggtagatattaaggccaatgcgtttgttcatcacatggtgcgcaacatc
gttggcagcctgatggacgtcgggtgtggcaatcgtcccgaatcgtggattgcggaactg
ttggcagccaaagatcgcacgttagcaggcgcaacggccagagccgaagggctgtatttg
gtggcggtagattaccccgcgcgttttgctttaccacggcctactatggggccgcttttt
ttagcggattga
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