Pectobacterium polonicum: LW347_15570
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Entry
LW347_15570 CDS
T08488
Name
(GenBank) type I secretion system permease/ATPase
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
ppoo
Pectobacterium polonicum
Pathway
ppoo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ppoo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LW347_15570
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppoo02000
]
LW347_15570
02044 Secretion system [BR:
ppoo02044
]
LW347_15570
Transporters [BR:
ppoo02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
LW347_15570
Secretion system [BR:
ppoo02044
]
Type I secretion system
Adhesin protein transporter
LW347_15570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_21
DUF87
RsgA_GTPase
ATP-synt_ab
Gtr1_RagA
AAA_29
ABC_ATPase
Monjiviricetes_fusion
Motif
Other DBs
NCBI-ProteinID:
UVO07311
UniProt:
A0AAE9SZ03
LinkDB
All DBs
Position
3467836..3470052
Genome browser
AA seq
738 aa
AA seq
DB search
MKLHSVQETKGSDESVAHESTVHEPIVHENSDPRSRHDDPLLDSLLILCALQGKSVSRTT
LTAGLPLANQRLSVKLLPRAAARAGLQGRVLKRSLNKISEMSLPAMLLLREGGAAILLGW
NADGSARLMPSETEGGEISVEHNMLQQNYLGLVMFAQPRHQFDLQNPSLIPHTKSWFRDT
LKLSRSLYLDAILASLLVNIIALATPLFVMNVYDRVVPNQATATLWVLAIGVTGAFVFDL
ILKTLRGICLDMAGKKTDLIISATLFERITGMSMKARPPRVGSFAQNIHEFQSLRDFLSS
LTLTTLIDFPFTLLLLLVIGIIGGPLVWVSILAYPIALLASWAMQKPLSATIEKTMHLAS
ERQATLIETLSCLDAIKVNNAESERQHQWEQTIGSLSKLEMRAKALSSLAVNLTQWFQQF
AGVAMIVVGVYMLINGKLSMGGLIACYMLNGRALMPLGQLSGLVSRYQQARLTMQTTEQM
MQLPQERSDNEHPLKRESIRGGIEFRDVTFNYPEQKTSSLQNISLTIAPGEKVGVIGRSG
SGKSSLQKLIVNLYQPNTGNILIDGVDARQLDVSDLRHNIGYVPQDIQLFSGSLRNNLIS
GARYVEDEAMLRAAEISGVNEFARLHPDGYNLQVGERGQQLSGGQRQAVAIARALLLDPP
ILVLDEPTSSMDNTSEDRLKQALAPVIAEKTLLLVTHRVSMLALVDRLVIVDKGKIIADG
PKAIVMDALKKGQINASR
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgcattcagtacaagagacgaagggttctgatgaatcggtcgcccatgagtct
accgttcatgaacccattgtccatgaaaatagtgaccctcgcagccgtcatgacgacccg
ttattggatagtttgctgatcctctgtgccttacaggggaaatccgtcagccgtaccaca
cttaccgctggcttgcctttagctaaccagcgattatccgtaaaattgctcccaagagcc
gcagctcgtgcagggttgcaagggcgcgttctcaaacgttccctgaataaaatttctgag
atgtcacttcccgcaatgttgctgctacgggaagggggagcggcgattctgttagggtgg
aacgccgacggcagcgcacgtctgatgcccagtgaaaccgaaggcggagaaatttccgtt
gagcataatatgctacaacagaattaccttggcttagtgatgttcgcccagccccgccat
cagttcgatttgcaaaatccgtcactgatccctcataccaaatcctggtttagagatacg
cttaagctttcacgctcgctctatctggatgccatccttgccagtttgctggtgaacatt
atcgcacttgccacgccgctgttcgtgatgaatgtctatgaccgagttgtacctaatcag
gcaacggcgacattatgggtgctggcaatcggcgtgactggtgcttttgttttcgattta
attctcaaaacgctacgcggcatttgcctcgatatggcgggcaaaaaaaccgatctgatt
atttcagccacgttatttgagcgcattactggaatgtcgatgaaggctcggccaccacga
gtcggtagttttgcgcaaaatattcatgaatttcagtcgctcagagatttcttgtcctcg
ctgacgctgacgacgctgatcgattttccctttacgctgcttctgctgctggtcattggc
atcatcggcggtccgctggtctgggtttccatactggcctaccctatcgccctgctggcg
agctgggcgatgcaaaaaccgttgtctgccacgattgaaaaaacgatgcatcttgccagt
gaacggcaggcaacactgatcgaaacgctaagttgcctagatgcgatcaaggtcaacaat
gcagaaagcgaacggcagcaccagtgggaacagaccattggcagtctgagtaagctggaa
atgcgagcgaaagcgttgtcttcactggcggtgaacctgacgcagtggtttcagcaattt
gctggcgtggccatgatcgtcgtcggcgtctatatgctaattaacggtaaactcagtatg
ggtgggctgattgcctgttacatgctgaacggcagagcgcttatgccgttaggtcaactg
tctgggctggtcagccgttatcagcaggcgcgtttgacgatgcaaaccaccgaacagatg
atgcaactaccgcaagaacgtagcgataacgaacacccgctgaagcgcgagagtatccga
ggtgggatcgaatttcgcgatgtgacgttcaactacccagaacaaaaaaccagttcactg
caaaacatcagtctgactatcgctcccggtgagaaagtgggtgtaattggccgcagcggc
tcaggaaaaagctcattgcaaaagctgatcgtgaatctctatcagcccaacacgggtaat
attctgatcgacggtgttgatgcccgccagttggatgtcagcgatttacgccacaatatc
ggctatgtcccgcaggatattcaattgttcagtggttcgctgcgcaataacctcattagc
ggcgcgcgctatgttgaagatgaagccatgctaagagccgctgaaatctcaggggtaaac
gagtttgcacgtctgcaccccgatggctataaccttcaggtcggtgaacgaggccaacaa
ctctccggcgggcagcgccaggctgtcgcgatagccagagcgctattgcttgaccctcca
attctggtgcttgatgaacccaccagttcgatggataacaccagcgaagatcggttaaaa
caagctctcgcccccgttattgcggaaaaaacgctgttgctggttacccatcgggtttcc
atgctggcgctggtcgatcgtttagtgattgtcgataaaggcaaaattattgcggatggg
ccgaaagcgatcgtgatggatgcgttgaagaaggggcagatcaatgcgtctcggtaa
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