KEGG   Pectobacterium polonicum: LW347_15615
Entry
LW347_15615       CDS       T08488                                 
Symbol
rnc
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
ppoo  Pectobacterium polonicum
Pathway
ppoo03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:ppoo00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    LW347_15615 (rnc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ppoo03019]
    LW347_15615 (rnc)
   03009 Ribosome biogenesis [BR:ppoo03009]
    LW347_15615 (rnc)
   03036 Chromosome and associated proteins [BR:ppoo03036]
    LW347_15615 (rnc)
Enzymes [BR:ppoo01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     LW347_15615 (rnc)
Messenger RNA biogenesis [BR:ppoo03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     LW347_15615 (rnc)
Ribosome biogenesis [BR:ppoo03009]
 Eukaryotic type
  90S particles
   RNase
    LW347_15615 (rnc)
 Prokaryotic type
  rRNA processing factors
   LW347_15615 (rnc)
Chromosome and associated proteins [BR:ppoo03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     LW347_15615 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm DSRM_2 RM44_endonuclase DND1_DSRM
Other DBs
NCBI-ProteinID: UVO07320
UniProt: A0AAE9NLL4
LinkDB
Position
complement(3478253..3478933)
AA seq 226 aa
MNPILINRLQRKLGYTFQQYELLLQALTHRSASSKHNERLEFLGDSILSFVIANALYHRF
PKVDEGDMSRMRATLVRGNTLAEIAREFELGECLRLGPGELKSGGFRRESILADTVEALI
GGIFLDSDILNIERLILNWYQTRLDEISPGDKQKDPKTRLQEFLQGRHLPLPTYLVVQVR
GEAHDQEFTIHCQVSGFSESVIGTGSSRRKAEQAAAEQALKKLELE
NT seq 681 nt   +upstreamnt  +downstreamnt
atgaatcccatcctgataaatcgtttacaaagaaagctgggctatacttttcagcagtac
gagcttttgttacaggcgttgacacatcgcagtgccagcagcaaacataatgaaagactc
gagtttctgggtgactccatcctgagttttgtgatcgctaatgcgctgtatcatcgtttt
cctaaggttgatgagggagacatgagccggatgcgagccactctggtgcggggtaatacc
ttggcggaaatcgcgcgtgaattcgagctgggagagtgcttgcgcctcggccccggtgaa
ttaaaaagcggtggtttccgtcgtgaatcgatattggctgatacggtcgaagccctgatt
ggcggcatttttctcgacagtgacatcctgaatatcgaacgtttgatcttgaattggtat
caaacgcgcctggatgaaatcagtcccggcgataagcaaaaagatccgaaaacgcggttg
caggagtttctgcaagggcgtcacctacctctacccacctatctggtggtacaggttcgt
ggggaagcacacgatcaggagtttactatccactgtcaggtgagcggctttagcgagtcg
gtcattggtacaggatcgagccgtcgtaaagccgaacaggctgcggctgaacaagcgttg
aaaaaactggagcttgaatga

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