Pectobacterium polonicum: LW347_15675
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Entry
LW347_15675 CDS
T08488
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ppoo
Pectobacterium polonicum
Pathway
ppoo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppoo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LW347_15675 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppoo03400
]
LW347_15675 (ung)
Enzymes [BR:
ppoo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
LW347_15675 (ung)
DNA repair and recombination proteins [BR:
ppoo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LW347_15675 (ung)
Prokaryotic type
LW347_15675 (ung)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
UVO07332
UniProt:
A0AAE9NPP5
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All DBs
Position
3490133..3490819
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AA seq
228 aa
AA seq
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MATSLTWHDVLAQEKQQPYFINTLEFVGKERASGKTIYPPQKDVFNAFRFTELHQVKVVI
LGQDPYHGPNQAHGLSFSVRPGVPAPPSLGNIYKELANDIPGFEIPRHGFLQSWAEQGVL
LLNTVLTVEAGQAHSHANLGWETFTDRVIAALNEQREGLVFLLWGSHAQKKGNIIDQQRH
HILKSPHPSPLSAHRGFLGCKHFSQANQLLEQQGLSPIDWTPRLPEEI
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atggcgacctctctcacctggcatgacgtgctggcacaagaaaaacagcagccttacttc
atcaatacccttgaatttgttgggaaagaacgagcttcgggtaagacgatctatcctccg
cagaaagatgtttttaacgcgttccgttttaccgaactgcatcaggtcaaagtcgtcatt
ctcggacaagatccctatcacggcccgaatcaggctcacgggctgtcattttctgtacgt
ccgggcgtccccgccccgccttccctaggtaatatttataaagagctggcaaacgatatc
cctgggtttgaaattccacgacacggttttctgcaaagctgggcggagcaaggcgttcta
ctgctaaacaccgtactaacggttgaggccgggcaagcgcactcgcatgctaatttgggc
tgggaaacctttactgaccgcgttattgctgcactgaatgaacagcgggaaggtctggtc
tttctcttgtggggctctcatgcacagaaaaaaggcaacatcattgaccaacagcgtcac
cacattctgaaatcaccacacccttccccactgtctgcacaccgtggatttttgggctgt
aagcatttttctcaggctaatcagcttttggaacagcaagggctatcgccaatagactgg
acaccaaggcttccggaagagatctaa
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