Pectobacterium polonicum: LW347_15965
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Entry
LW347_15965 CDS
T08488
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ppoo
Pectobacterium polonicum
Pathway
ppoo03030
DNA replication
ppoo03430
Mismatch repair
ppoo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppoo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LW347_15965 (dnaQ)
03430 Mismatch repair
LW347_15965 (dnaQ)
03440 Homologous recombination
LW347_15965 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppoo03032
]
LW347_15965 (dnaQ)
03400 DNA repair and recombination proteins [BR:
ppoo03400
]
LW347_15965 (dnaQ)
Enzymes [BR:
ppoo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LW347_15965 (dnaQ)
DNA replication proteins [BR:
ppoo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LW347_15965 (dnaQ)
DNA repair and recombination proteins [BR:
ppoo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LW347_15965 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
UVO07377
UniProt:
A0AAE9NPS5
LinkDB
All DBs
Position
complement(3545706..3546443)
Genome browser
AA seq
245 aa
AA seq
DB search
MSTEITRQIVLDTETTGMNKLGVHYEGHKIIEIGAVEVINRRLTGRHFHVYIKPDRLVDP
EAYNIHGISDEFLADKPMYADIADDFLDFIRGAELVIHNAMFDIGFMDYEFRLLNRDLPK
TETFCKITDSLLMARKIFPGKRNSLDALCDRYLIDNSKRTLHGALLDAEILAEVYLAMTG
GQTSLTFSTEGETQQQNENSETIQRIARPQSALKVLYADEAELLAHEQRLDLIAKKGGSC
LWRAE
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgagcactgaaattacgcgacaaatcgtcctcgatacagaaaccaccggtatgaataaa
ctgggggttcactacgaagggcataaaattatcgagatcggtgcggtcgaggtgattaac
cgtcgcctgactggccgccattttcacgtctacatcaaacccgaccgtttagttgaccca
gaggcctataacatacatggtatcagcgatgaatttcttgctgacaaaccgatgtatgct
gatattgcggatgatttcctcgattttatccgtggcgcggagttggtcattcataacgcg
atgtttgatatcggctttatggattatgaatttcgattgctgaatcgggatcttcctaag
acggaaacgttctgtaagatcaccgatagcctgcttatggcgcggaagatctttcccggc
aaacggaacagtttggatgcgctctgcgatcgctatttaatagataatagcaagcgtacg
ctgcacggcgcattgctcgatgccgagattctggcagaagtttatctggcgatgaccggt
ggtcaaacgtcgctaactttttcgacggaaggtgaaacgcagcagcagaatgagaatagc
gagacgatccaaagaattgcccgtccacaatcagcgctaaaggtgctttatgccgatgag
gccgagctattagcacatgagcaacgcttggatctgattgctaaaaaaggtggtagctgc
ctgtggcgggcagaataa
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