Pectobacterium polonicum: LW347_16420
Help
Entry
LW347_16420 CDS
T08488
Name
(GenBank) DUF6531 domain-containing protein
Organism
ppoo
Pectobacterium polonicum
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
RHS
Colicin-DNase
WHH
DUF4595
OCRE
DUF4112
TEN_YD-shell
SpaA
DUF7402
CarboxypepD_reg
Motif
Other DBs
NCBI-ProteinID:
UVO07440
UniProt:
A0AAE9NLV6
LinkDB
All DBs
Position
complement(3618433..3623733)
Genome browser
AA seq
1766 aa
AA seq
DB search
MSQDKSSALAASGDAAKRNFTTDNKISGGCTTCGCEILVRYHYDSGEPIPNAPFQVTDSN
NHKIRGKTDENGMFFIHDMGCNTYELLLGEGSDTFDPKETVKNNPVLMSNPAYASFAGEY
FSLFVILREQGIAQYGSVQQSVRMPLSDIPEQYKPALKRFWELEKQLHRDDGELQREIRR
IQHRMSAEVASEASSVDNAVLLICEVMLGCVPVVGQAMDVYFLGQWCWYSYKNPNLLNDT
MHRIDGVLCVIGFVPGVGDALKVSGNAITQALRKLKGAKGNKQQDIEEATQIIRRLSNGN
IVTWLTGIRSDIRIYADKGQEILKTIKEALDLLVKGASGERSWIVALMADSFRAMVDVLE
KLIAIFTIVTALIEAEFAEFIPQIMTQVIGSARPKGSCELSAMAVQKGGSGDYRTEEEIT
EFNQRVERPGGLTMAEASLIPTIGILPGVLGGGKNKVGMAAKGGKHSPSSPPASPASHTP
PTPPKQPHSPPTDTPNAQDKHQPKTGDNNQKNKSSAHGRHGSDENKNTSDDGKTVQTPTG
AENVTPGARTPPTDGATAAQERAKRENGETKNDPKKGEQNGDPVDMATGAVVEQRADIQL
AGALPLSMQRYYRSTGERHPGLLGKLWRTNWDISLTLSSGIATLTDGEFNQAFFALPNEG
ESSRSSSNPQWRLTRQQGELVLHHVGGLCYRFEYALGLQLCLTSIDDAAGNRIAFEWVLG
ELRWVVLSDGRLVHVTSEHQRITTLTLCTPQRQPLKTLASYTYDDRGHLLSVRADEGRNF
DYGYSPEGWLLRWSDLGSTWVEHDYDKKGRAIRDRTSEGYWPGHFEYDDDTLTSHYHSGF
GGIFSYVRDERNNILLKRTPDGGETRYEWVDNQLVAETDPLGGRTVYQRNDWGQVTEVTL
PDGATHQYAYDDNGRLLSYTDPLSSEWRYQRNAAGQVVEVNDPEGREWLYRYGEAGQLST
VIGPDGVLQRYHYNRRGLLSCLERDNAPSVTFRYDDLDRLTERHIGHEAGLQVRRWEYDG
VRESPSKVVYEDGSETRFGYDVEGNLTAVTDALGQRYQFRYGAFDNLLEATDPLGATVRY
HYNAEAEFAGVTNSQGRDWTYGFDHSGRLSEERHYDGRVYRYDYDVADRLVQRTAPDGST
LHYEHDAAGRITRITARKADGETDGITELDYDVAGRLSKAASPDAVVEYVYNRAGQVTSE
TVNGEAVQSGYDAGGQRAVVEGILSPLQLAWQSGRLSSLGIGSHQPLQFSHTAAGEEQRR
SNGSGFALRHEWSPTGLLQRQALEGADGRVNDVLERRYQYDVLDRLTGISDSHWGEQAFR
LNGAGQVTAERRDEGRRRQARLFGYDSEQNLCEVSQIAPGLGETLKVQDAVVQSSARYDA
AGRVVERGHTQYRYDDCGRLAMKRETRAGFRPKDTYFDWDVQDRLVRVSLPDGARWRYRY
DAFGRRIQKVREGQVPSAQAVARVAYRWDGDQLIGQQQYYADGSAAREVQWVYEPGSFRP
LAQVEAQGESTQLHYIVTDLTGTARELCSEEGEVRWRGEQSLWGGHREERRPIPLRRYLG
DAANEEVYCELRYQGQLYDAETGLYYNRHRYYDAESGQYLSPDPIGLRGGTRPQAYVHNP
LEWVDPFGLATRPNNGKYHIFHDHQVDSTNRYSSDSVQFRNANKELVSQLETDPAFRRDM
LGRYPELAEWSKSGNMSNSPPGLTWHHHEDVNRLVLVDRRDHSANHSIYHPTGKGGRDMW
GGGKDGRTGKLDGKTGAKKCKQKRES
NT seq
5301 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaggataaaagcagcgcgttagctgccagcggggatgccgcaaagcgtaatttc
accacggataataagatttcagggggatgtacaacctgtggctgcgaaatattggtgcgt
taccattacgattcaggtgaacccatcccgaatgccccttttcaggtaaccgatagcaat
aaccacaaaataaggggtaaaaccgacgagaacggcatgtttttcatccatgacatgggg
tgtaacacgtatgaactgctgttaggggaaggtagcgataccttcgaccctaaggaaacg
gtgaaaaacaaccccgttttgatgtctaaccctgcctatgcgagttttgccggagaatat
ttttccctgttcgtcatcctgagagagcaagggatcgcgcagtatggttccgtccagcag
tctgtgaggatgccgctgagcgatataccggagcaatataaaccggcgttgaagcgtttc
tgggaattggaaaagcagttgcatagagatgatggtgaactccaacgggaaatccgtcga
attcaacatcgaatgtcggcggaggtggcaagtgaggcatccagtgttgataacgccgtt
ctgctgatctgtgaggtaatgctgggctgtgttcccgtggttggacaggcgatggatgtc
tacttccttgggcaatggtgttggtatagctataaaaatcctaacttattgaacgacacc
atgcaccgaattgacggggtgctgtgtgtcattggctttgttcctggcgtcggggatgcg
ctaaaagtcagtggaaatgccattacgcaagccttacggaagctgaaaggcgcgaaaggc
aacaaacagcaggatattgaggaagccacgcagattattcgccgtttgagtaacgggaat
atagtcacctggctaacgggtatacgttctgatatcagaatctatgctgataaagggcaa
gaaatactgaaaaccatcaaagaggcgctggacctgctagtgaaaggtgcttctggtgag
cgcagttggatagtcgcgctgatggccgacagtttccgagccatggtggatgtgctcgaa
aaattaatcgcaatttttaccatcgtgacggcattgattgaagccgagtttgctgaattt
attccccaaatcatgacgcaggttattggaagtgcgcggcctaaagggagctgtgaatta
tctgcgatggctgtgcaaaagggcggatcgggagactaccgtactgaagaggaaattact
gaatttaatcaacgggtagaaagacctggtggcttgacgatggctgaggccagcctgata
ccgacaataggaatattgcctggtgttttgggaggcggtaagaataaagtcggcatggcc
gctaaagggggaaaacattcgccgagttctccacctgcttctccagcctcacatacacca
cctactccacctaagcagcctcattctcccccgacggacacgccaaatgctcaggataag
catcagcccaaaactggcgataataatcaaaaaaataagtcttccgctcatgggcgacat
ggctcggatgagaacaaaaacacatcagatgacgggaaaaccgttcaaacgcccacaggt
gccgagaatgtaacgcccggtgccagaactccccctacagacggtgctactgctgcccag
gaaagagcaaagagagaaaacggggagacgaaaaatgacccgaagaaaggcgagcaaaac
ggcgatccggttgatatggcaaccggtgctgtggtggagcagcgcgctgatattcagtta
gcgggggcgctgccgctgtcaatgcaacgttattatcgttccacgggagaacgacatccc
ggtttgctggggaaactgtggcgcaccaattgggacatcagtctgacgctcagcagcggg
atagctacgctaacggatggcgagttcaatcaggcatttttcgctttgcccaatgaagga
gagtccagccgctcatcgtccaacccacaatggcggctgacccggcagcagggtgagctg
gtgctccatcacgtcggtggcctgtgctatcggtttgaatatgcacttggtctccagctt
tgcctgacgtctatcgacgatgcggcgggcaatcggattgctttcgagtgggtgttggga
gaactgcgctgggttgtgctgtctgatgggcgtttggttcatgtcacatcggaacaccaa
aggatcacgacactgacgctatgtacaccgcagcgtcagccattaaaaacgctggcaagc
tatacctatgatgaccgtgggcatttattgagcgtgcgggcggatgaagggcgtaacttt
gattatggctactcaccggaaggctggttgctgcgctggtcggatttaggttcgacttgg
gtggagcacgactacgataaaaaaggccgcgccatacgggacaggacctcggaaggttac
tggccgggtcactttgaatatgacgatgatactctgaccagccattaccatagcggattt
ggcgggatattcagctacgtgcgtgacgaacgcaacaatatcctgctcaaacgtacacct
gatggtggggagactcgatacgagtgggtggataaccaactggtagcggagaccgatccg
ctgggcggccgcacggtgtatcagcgcaatgactgggggcaggtgaccgaggttaccctg
cctgacggtgcgacgcatcagtatgcgtatgacgacaatggacgactgctgagctatacc
gacccattgagcagtgaatggcgctatcagcggaatgcagccgggcaggttgttgaggtg
aacgacccggaagggcgggagtggctgtaccgttatggtgaagcggggcaactgtcgacg
gtgataggcccggacggcgtattgcagcgttaccactataaccgccgtggcctgctgagc
tgccttgagcgggataatgccccatcggtaacgttccggtatgacgaccttgaccgtctg
accgagcggcatattgggcatgaggcgggcttacaggtccgacgctgggagtatgatggt
gtacgcgaatcaccgtcgaaagtggtgtatgaagacggcagcgagacgcgctttggttac
gatgtagaaggtaacctgacggcggtgacggatgcgctagggcaacgttaccagttccgc
tacggggcgttcgataacctgctggaagcgaccgacccgctgggggcgacggtgcgctac
cactataacgcggaagcggagttcgccggggtgacgaacagtcagggacgggactggacg
tatggctttgaccacagtggacggctgagtgaagagcggcattacgacgggcgggtgtac
cgttatgactacgatgtggcagaccgcctggtgcagcgtactgcgccggatggcagtacg
ctgcactacgagcatgatgcggccggccggataacgcgcatcacggcgcggaaggcggac
ggggaaacagacggcatcacggaactggactatgacgtggccgggcggttgagcaaagcc
gccagcccggatgcggtggtggaatacgtctataaccgggcgggtcaggtgacatcggaa
acggtgaacggcgaggcggtacaaagcggttatgatgcgggcggccagcgtgccgtggtt
gaagggattctgtccccgctgcaactggcgtggcagtcggggcggctgtcgtcgctgggg
ataggttcacaccagccgttgcagttcagccacacggcggcgggcgaagagcagcggcgg
agtaacggtagtggatttgcgctacgccacgaatggagtccgacgggattgttgcagcgt
caggcgctggaaggggcggatggtcgggtgaatgatgtgctggagcggcgctaccagtac
gatgtgctggaccgtctgacgggcatcagcgacagccactggggtgagcaggcattcagg
ctgaacggggcgggtcaggtgacggcggagcgtcgtgatgagggacggcggcgtcaggcg
cggctgtttggttacgacagcgaacagaatctgtgtgaggtgtcgcagatagcgccgggt
ctgggtgagacgctgaaggtgcaggatgcggtggtgcagtcgtcggcgcggtatgatgcg
gcgggtcgggtggtggagcgtgggcatacgcagtaccggtacgatgactgcgggcgtctg
gcgatgaagcgggaaacgcgtgcggggttcaggccgaaggacacgtatttcgactgggat
gtacaggaccgtctggtgcgggtgagtttgccggacggtgcgcggtggcggtatcgttac
gatgcgtttggtcgccgaatccagaaggtgcgcgaggggcaggtgccatcggcgcaggcg
gtagcgcgggtggcgtaccggtgggacggtgaccagcttatcggtcagcagcaatactat
gcagatggcagtgcggcaagggaagtgcagtgggtgtacgagccgggtagcttccggccg
ctggcacaggtggaagcgcagggggaaagtacacagttgcactacatcgtgactgacctg
acgggtacggcgagagagctgtgcagcgaggaaggggaagttcgctggcgcggcgaacag
agcctgtggggtggacaccgtgaggagcggcggcctattccgctgcgtcgctatctgggg
gatgcggcgaatgaggaagtgtactgcgagctgcgctatcaggggcagttgtacgatgcg
gaaacggggctttactacaaccgacatcgttactatgatgcggagagtgggcagtacctg
tcgcctgacccgatagggctaagaggtggtacacgacctcaagcgtatgtgcacaaccct
ttagaatgggttgatccgttcgggctggcgacaagaccaaataatggtaaatatcatatt
ttccatgaccaccaagttgattcaactaatagatactcaagtgatagcgttcaatttaga
aacgcaaataaagaactggtatcacagttggaaacagatccggcatttagaagagatatg
ttaggacgatatccagaacttgctgagtggtcgaagtcagggaatatgtctaatagccct
cctggattgacatggcaccatcatgaagatgtcaatcgtcttgttctggtcgatcgaagg
gatcactcagcaaatcattcaatttaccatccaacaggaaagggagggcgagatatgtgg
ggaggtggtaaagatggtcggacgggcaagttggatggaaaaacaggagcgaagaaatgc
aagcaaaaaagagagagttga
DBGET
integrated database retrieval system
