KEGG   Pectobacterium polonicum: LW347_16535
Entry
LW347_16535       CDS       T08488                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
ppoo  Pectobacterium polonicum
Brite
KEGG Orthology (KO) [BR:ppoo00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ppoo02044]
    LW347_16535 (tssC)
Secretion system [BR:ppoo02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   LW347_16535 (tssC)
SSDB
Motif
Pfam: VipB VipB_2
Other DBs
NCBI-ProteinID: UVO07460
UniProt: A0AAE9SYR8
LinkDB
Position
complement(3651697..3653175)
AA seq 492 aa
MSIIEEQVQAGAASASGSLLDDIMAQARISPVDEGYSVAKQGIAALVANILDSGNAAEPV
NKALVDSMIVELDKKLSKQIDVILHAKELQELESSWRSMKLLVDRTDFRENIKLLVLHAT
KEELLEDFEFAPEISQSGFYKHVYSSGYGQFGGQPIGGVIGDYALTQSSPDIKLMQYVSA
VGAMAHAPFISSVAPTFFGVDRFTDLPSIKDLKSVFEGPAYTKWRSLRESEDGRYLGLTA
PRFLARLPYDPVENPIKGFNYKEDISTDHEHYLWGNTAYLMGTALTDSFAKYRWCPNIIG
PQSGGAITDLPVHVYEAMGQLQAKIPTEVLITDRREYEMAEEGFITLTMRKDSDNAAFFS
ANSVQKPKVFPNTKEGKEAETNYKLGTQLPYMFIINRLAHYIKVLQREQIGSWKERQDLE
RELNTWIKQYIADQENPPADVRSRRPLRAAQIKVLDVEGEPGWYQVTMSVRPHFKYMGAN
FELSLVGRLDKE
NT seq 1479 nt   +upstreamnt  +downstreamnt
atgtcaataattgaagaacaggttcaggcaggcgctgccagcgcttctggatcgctgctt
gatgacatcatggctcaagcgcgtatcagtccggttgatgaaggctacagcgtggctaaa
cagggcattgccgcgctggtcgctaatattcttgatagcggtaatgcagcagagcccgtg
aacaaagcgctggtcgatagcatgatcgtcgaactggacaaaaagctcagcaagcagatt
gacgttattctgcatgctaaagaattacaggaactggaatcttcctggcgttcgatgaaa
ctgctggtcgatcgcactgatttccgtgaaaacatcaaactgttggtgttgcatgcgacg
aaagaagagctgttggaagattttgaattcgcgcctgaaatctcacagtctggcttctat
aagcacgtatattccagcggttacggccagtttggcggccagcctatcggtggcgtgatt
ggtgactatgcgctgacgcaaagctcaccagacatcaaactgatgcagtatgtcagcgcc
gttggcgcgatggcgcatgcgccgttcatctcttccgttgctccaaccttctttggcgtg
gatcgcttcaccgatctgccttccatcaaagatctgaaatccgttttcgaaggcccggct
tatacgaaatggcgttcgctgcgtgagtccgaagatggtcgctatctggggctgacggca
ccgcgcttcctggctcgcctgccttatgatccagtagaaaacccgattaagggcttcaac
tacaaggaagatatcagcaccgatcacgaacactatctgtggggcaataccgcctacttg
atgggaacggcgctgacggacagcttcgcgaaataccgctggtgtccgaacatcatcggt
ccgcagagcggcggtgcgattaccgacctgcctgtgcatgtttatgaagccatgggccaa
cttcaggccaagatcccgactgaagtgctgatcaccgatcgtcgcgaatatgaaatggcc
gaagaaggctttatcacgctgacgatgcgtaaagacagcgacaatgcggctttcttctcg
gctaactcggtgcagaagccgaaggtgttcccgaacaccaaagaaggcaaagaagcggaa
accaactacaagctgggtacgcaactgccgtacatgttcatcatcaaccgtctggcgcac
tacatcaaagtgttgcagcgtgaacagattggctcatggaaagagcgtcaggatcttgag
cgtgagttgaatacctggattaaacagtacatcgccgatcaggaaaacccgccggcagat
gttcgtagccgtcgtcctctgcgtgccgcacaaatcaaagtgctggatgtagaaggagaa
ccaggttggtatcaggtcaccatgtctgtgcgcccgcacttcaagtacatgggggcgaac
tttgagctgtcgctggtagggcgtttggataaggaataa

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